Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NAF1Q96HR8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NAF1Q96HR8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
NAF1Q96HR8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
NAF1Q96HR8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
NAF1Q96HR8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.82■■□□□ 1.24
NAF1Q96HR8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
NAF1Q96HR8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
NAF1Q96HR8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
NAF1Q96HR8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NAF1Q96HR8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NAF1Q96HR8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.81■■□□□ 1.24
NAF1Q96HR8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
NAF1Q96HR8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.81■■□□□ 1.24
NAF1Q96HR8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.81■■□□□ 1.24
NAF1Q96HR8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NAF1Q96HR8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
NAF1Q96HR8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
NAF1Q96HR8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NAF1Q96HR8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NAF1Q96HR8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
NAF1Q96HR8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
NAF1Q96HR8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.8■■□□□ 1.24
NAF1Q96HR8 KRT18P24-201ENST00000344739 1156 ntBASIC22.8■■□□□ 1.24
NAF1Q96HR8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.8■■□□□ 1.24
NAF1Q96HR8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.8■■□□□ 1.24
NAF1Q96HR8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.8■■□□□ 1.24
NAF1Q96HR8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
NAF1Q96HR8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.8■■□□□ 1.24
NAF1Q96HR8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.8■■□□□ 1.24
NAF1Q96HR8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NAF1Q96HR8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
NAF1Q96HR8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.79■■□□□ 1.24
NAF1Q96HR8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
NAF1Q96HR8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NAF1Q96HR8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.79■■□□□ 1.24
NAF1Q96HR8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NAF1Q96HR8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.79■■□□□ 1.24
NAF1Q96HR8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.79■■□□□ 1.24
NAF1Q96HR8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
NAF1Q96HR8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.79■■□□□ 1.24
NAF1Q96HR8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NAF1Q96HR8 AC142472.1-201ENST00000612013 1741 ntBASIC22.79■■□□□ 1.24
NAF1Q96HR8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.79■■□□□ 1.24
NAF1Q96HR8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
NAF1Q96HR8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.78■■□□□ 1.24
NAF1Q96HR8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.78■■□□□ 1.24
NAF1Q96HR8 LINC00565-201ENST00000562710 2331 ntBASIC22.78■■□□□ 1.24
NAF1Q96HR8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.78■■□□□ 1.24
NAF1Q96HR8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NAF1Q96HR8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NAF1Q96HR8 C9orf163-202ENST00000624034 2573 ntBASIC22.78■■□□□ 1.24
NAF1Q96HR8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NAF1Q96HR8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
NAF1Q96HR8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NAF1Q96HR8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
NAF1Q96HR8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NAF1Q96HR8 AC137630.3-201ENST00000607245 391 ntBASIC22.77■■□□□ 1.24
NAF1Q96HR8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
NAF1Q96HR8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NAF1Q96HR8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NAF1Q96HR8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NAF1Q96HR8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.23
NAF1Q96HR8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.76■■□□□ 1.23
NAF1Q96HR8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.76■■□□□ 1.23
NAF1Q96HR8 AC120024.1-201ENST00000562672 995 ntBASIC22.76■■□□□ 1.23
NAF1Q96HR8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
NAF1Q96HR8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
NAF1Q96HR8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NAF1Q96HR8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.76■■□□□ 1.23
NAF1Q96HR8 AC021242.3-201ENST00000607598 1377 ntBASIC22.76■■□□□ 1.23
NAF1Q96HR8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
NAF1Q96HR8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NAF1Q96HR8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NAF1Q96HR8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.75■■□□□ 1.23
NAF1Q96HR8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.75■■□□□ 1.23
NAF1Q96HR8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.75■■□□□ 1.23
NAF1Q96HR8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.75■■□□□ 1.23
NAF1Q96HR8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
NAF1Q96HR8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NAF1Q96HR8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.75■■□□□ 1.23
NAF1Q96HR8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NAF1Q96HR8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NAF1Q96HR8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.75■■□□□ 1.23
NAF1Q96HR8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NAF1Q96HR8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NAF1Q96HR8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.74■■□□□ 1.23
NAF1Q96HR8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.74■■□□□ 1.23
NAF1Q96HR8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NAF1Q96HR8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NAF1Q96HR8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.74■■□□□ 1.23
NAF1Q96HR8 AC092028.1-203ENST00000608262 953 ntBASIC22.74■■□□□ 1.23
NAF1Q96HR8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
NAF1Q96HR8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NAF1Q96HR8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NAF1Q96HR8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
NAF1Q96HR8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
NAF1Q96HR8 AC110285.6-201ENST00000617652 491 ntBASIC22.73■■□□□ 1.23
NAF1Q96HR8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.73■■□□□ 1.23
NAF1Q96HR8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms