Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.66■□□□□ 0.74
CPNE2Q96FN4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE2Q96FN4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE2Q96FN4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CPNE2Q96FN4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE2Q96FN4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE2Q96FN4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.65■□□□□ 0.74
CPNE2Q96FN4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CPNE2Q96FN4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.65■□□□□ 0.74
CPNE2Q96FN4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE2Q96FN4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CPNE2Q96FN4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.65■□□□□ 0.74
CPNE2Q96FN4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE2Q96FN4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CPNE2Q96FN4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE2Q96FN4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.64■□□□□ 0.73
CPNE2Q96FN4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE2Q96FN4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CPNE2Q96FN4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.64■□□□□ 0.73
CPNE2Q96FN4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE2Q96FN4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CPNE2Q96FN4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.63■□□□□ 0.73
CPNE2Q96FN4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.63■□□□□ 0.73
CPNE2Q96FN4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CPNE2Q96FN4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE2Q96FN4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE2Q96FN4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE2Q96FN4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CPNE2Q96FN4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE2Q96FN4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.62■□□□□ 0.73
CPNE2Q96FN4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE2Q96FN4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.62■□□□□ 0.73
CPNE2Q96FN4 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.62■□□□□ 0.73
CPNE2Q96FN4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 AC019171.1-201ENST00000601251 1056 ntBASIC19.61■□□□□ 0.73
CPNE2Q96FN4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPNE2Q96FN4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 AC139795.1-202ENST00000500444 432 ntBASIC19.6■□□□□ 0.73
CPNE2Q96FN4 AC129492.7-201ENST00000622992 756 ntBASIC19.6■□□□□ 0.73
CPNE2Q96FN4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.6■□□□□ 0.73
CPNE2Q96FN4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CPNE2Q96FN4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE2Q96FN4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE2Q96FN4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE2Q96FN4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.59■□□□□ 0.73
CPNE2Q96FN4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE2Q96FN4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPNE2Q96FN4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.59■□□□□ 0.73
CPNE2Q96FN4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPNE2Q96FN4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.58■□□□□ 0.72
CPNE2Q96FN4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.58■□□□□ 0.72
CPNE2Q96FN4 HSD17B1P1-201ENST00000590052 955 ntBASIC19.58■□□□□ 0.72
CPNE2Q96FN4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CPNE2Q96FN4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.58■□□□□ 0.72
CPNE2Q96FN4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE2Q96FN4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE2Q96FN4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE2Q96FN4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CPNE2Q96FN4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE2Q96FN4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.57■□□□□ 0.72
CPNE2Q96FN4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE2Q96FN4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
CPNE2Q96FN4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE2Q96FN4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.57■□□□□ 0.72
CPNE2Q96FN4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE2Q96FN4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE2Q96FN4 U85056.1-201ENST00000616429 682 ntBASIC19.57■□□□□ 0.72
CPNE2Q96FN4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE2Q96FN4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.57■□□□□ 0.72
CPNE2Q96FN4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPNE2Q96FN4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms