Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AL356740.2-201ENST00000601559 647 ntBASIC20.44■□□□□ 0.86
CPNE4Q96A23 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE4Q96A23 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CPNE4Q96A23 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE4Q96A23 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE4Q96A23 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE4Q96A23 AL117332.1-201ENST00000622628 974 ntBASIC20.43■□□□□ 0.86
CPNE4Q96A23 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.43■□□□□ 0.86
CPNE4Q96A23 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE4Q96A23 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.43■□□□□ 0.86
CPNE4Q96A23 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE4Q96A23 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.42■□□□□ 0.86
CPNE4Q96A23 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE4Q96A23 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.42■□□□□ 0.86
CPNE4Q96A23 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE4Q96A23 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.42■□□□□ 0.86
CPNE4Q96A23 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE4Q96A23 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE4Q96A23 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE4Q96A23 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.42■□□□□ 0.86
CPNE4Q96A23 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE4Q96A23 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE4Q96A23 MIR3621-201ENST00000580529 85 ntBASIC20.41■□□□□ 0.86
CPNE4Q96A23 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.41■□□□□ 0.86
CPNE4Q96A23 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CPNE4Q96A23 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE4Q96A23 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CPNE4Q96A23 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE4Q96A23 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.4■□□□□ 0.86
CPNE4Q96A23 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CPNE4Q96A23 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE4Q96A23 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE4Q96A23 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.4■□□□□ 0.86
CPNE4Q96A23 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.4■□□□□ 0.86
CPNE4Q96A23 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CPNE4Q96A23 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE4Q96A23 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE4Q96A23 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE4Q96A23 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.39■□□□□ 0.85
CPNE4Q96A23 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE4Q96A23 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE4Q96A23 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE4Q96A23 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.39■□□□□ 0.85
CPNE4Q96A23 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.39■□□□□ 0.85
CPNE4Q96A23 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.39■□□□□ 0.85
CPNE4Q96A23 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE4Q96A23 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CPNE4Q96A23 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE4Q96A23 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CPNE4Q96A23 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.39■□□□□ 0.85
CPNE4Q96A23 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE4Q96A23 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CPNE4Q96A23 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.38■□□□□ 0.85
CPNE4Q96A23 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.38■□□□□ 0.85
CPNE4Q96A23 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.38■□□□□ 0.85
CPNE4Q96A23 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.38■□□□□ 0.85
CPNE4Q96A23 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.38■□□□□ 0.85
CPNE4Q96A23 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE4Q96A23 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE4Q96A23 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.38■□□□□ 0.85
CPNE4Q96A23 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
CPNE4Q96A23 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.37■□□□□ 0.85
CPNE4Q96A23 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CPNE4Q96A23 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CPNE4Q96A23 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE4Q96A23 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CPNE4Q96A23 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.37■□□□□ 0.85
CPNE4Q96A23 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CPNE4Q96A23 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.37■□□□□ 0.85
CPNE4Q96A23 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CPNE4Q96A23 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.37■□□□□ 0.85
CPNE4Q96A23 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.36■□□□□ 0.85
CPNE4Q96A23 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE4Q96A23 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE4Q96A23 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE4Q96A23 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CPNE4Q96A23 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.36■□□□□ 0.85
CPNE4Q96A23 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE4Q96A23 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.36■□□□□ 0.85
CPNE4Q96A23 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.36■□□□□ 0.85
CPNE4Q96A23 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
CPNE4Q96A23 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CPNE4Q96A23 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE4Q96A23 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE4Q96A23 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CPNE4Q96A23 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CPNE4Q96A23 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.35■□□□□ 0.85
CPNE4Q96A23 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.35■□□□□ 0.85
CPNE4Q96A23 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.35■□□□□ 0.85
CPNE4Q96A23 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.35■□□□□ 0.85
CPNE4Q96A23 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE4Q96A23 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE4Q96A23 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPNE4Q96A23 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.34■□□□□ 0.85
CPNE4Q96A23 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.34■□□□□ 0.85
CPNE4Q96A23 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.34■□□□□ 0.85
CPNE4Q96A23 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.34■□□□□ 0.85
CPNE4Q96A23 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.34■□□□□ 0.85
CPNE4Q96A23 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CPNE4Q96A23 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms