Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC32.33■■■□□ 2.77
PTPRUQ92729 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PTPRUQ92729 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PTPRUQ92729 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC32.33■■■□□ 2.77
PTPRUQ92729 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC32.33■■■□□ 2.77
PTPRUQ92729 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
PTPRUQ92729 MIR6089-201ENST00000616698 64 ntBASIC32.33■■■□□ 2.77
PTPRUQ92729 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
PTPRUQ92729 SLC47A1P1-202ENST00000449666 945 ntBASIC32.32■■■□□ 2.76
PTPRUQ92729 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC32.32■■■□□ 2.76
PTPRUQ92729 NKILA-201ENST00000613231 537 ntTSL 4 BASIC32.32■■■□□ 2.76
PTPRUQ92729 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
PTPRUQ92729 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
PTPRUQ92729 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC32.31■■■□□ 2.76
PTPRUQ92729 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC32.31■■■□□ 2.76
PTPRUQ92729 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
PTPRUQ92729 AC027612.3-201ENST00000413684 1047 ntBASIC32.31■■■□□ 2.76
PTPRUQ92729 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
PTPRUQ92729 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC32.31■■■□□ 2.76
PTPRUQ92729 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PTPRUQ92729 VGF-203ENST00000611537 1622 ntTSL 5 BASIC32.31■■■□□ 2.76
PTPRUQ92729 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC32.3■■■□□ 2.76
PTPRUQ92729 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PTPRUQ92729 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PTPRUQ92729 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC32.3■■■□□ 2.76
PTPRUQ92729 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
PTPRUQ92729 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
PTPRUQ92729 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
PTPRUQ92729 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
PTPRUQ92729 DENND3-207ENST00000518347 850 ntTSL 2 BASIC32.29■■■□□ 2.76
PTPRUQ92729 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC32.29■■■□□ 2.76
PTPRUQ92729 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC32.29■■■□□ 2.76
PTPRUQ92729 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
PTPRUQ92729 GTSE1-AS1-202ENST00000623117 1518 ntBASIC32.29■■■□□ 2.76
PTPRUQ92729 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC32.29■■■□□ 2.76
PTPRUQ92729 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
PTPRUQ92729 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC32.28■■■□□ 2.76
PTPRUQ92729 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC32.28■■■□□ 2.76
PTPRUQ92729 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PTPRUQ92729 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
PTPRUQ92729 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
PTPRUQ92729 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC32.27■■■□□ 2.76
PTPRUQ92729 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC32.27■■■□□ 2.76
PTPRUQ92729 TSPY26P-201ENST00000476365 1326 ntBASIC32.27■■■□□ 2.76
PTPRUQ92729 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
PTPRUQ92729 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC32.27■■■□□ 2.76
PTPRUQ92729 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
PTPRUQ92729 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC32.27■■■□□ 2.76
PTPRUQ92729 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PTPRUQ92729 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC32.26■■■□□ 2.76
PTPRUQ92729 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC32.26■■■□□ 2.76
PTPRUQ92729 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC32.26■■■□□ 2.76
PTPRUQ92729 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
PTPRUQ92729 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
PTPRUQ92729 SLC6A10P-202ENST00000431994 2058 ntBASIC32.26■■■□□ 2.75
PTPRUQ92729 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
PTPRUQ92729 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
PTPRUQ92729 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC32.25■■■□□ 2.75
PTPRUQ92729 DLX3-202ENST00000512495 834 ntTSL 2 BASIC32.25■■■□□ 2.75
PTPRUQ92729 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
PTPRUQ92729 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC32.24■■■□□ 2.75
PTPRUQ92729 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PTPRUQ92729 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PTPRUQ92729 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PTPRUQ92729 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PTPRUQ92729 AC004911.1-201ENST00000416316 871 ntBASIC32.24■■■□□ 2.75
PTPRUQ92729 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC32.24■■■□□ 2.75
PTPRUQ92729 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC32.24■■■□□ 2.75
PTPRUQ92729 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC32.24■■■□□ 2.75
PTPRUQ92729 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
PTPRUQ92729 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
PTPRUQ92729 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC32.24■■■□□ 2.75
PTPRUQ92729 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
PTPRUQ92729 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
PTPRUQ92729 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
PTPRUQ92729 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC32.23■■■□□ 2.75
PTPRUQ92729 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
PTPRUQ92729 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC32.23■■■□□ 2.75
PTPRUQ92729 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
PTPRUQ92729 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC32.23■■■□□ 2.75
PTPRUQ92729 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC32.22■■■□□ 2.75
PTPRUQ92729 AL022069.1-201ENST00000568025 1636 ntBASIC32.22■■■□□ 2.75
PTPRUQ92729 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC32.22■■■□□ 2.75
PTPRUQ92729 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC32.22■■■□□ 2.75
PTPRUQ92729 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
PTPRUQ92729 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC32.22■■■□□ 2.75
PTPRUQ92729 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
PTPRUQ92729 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PTPRUQ92729 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PTPRUQ92729 AC126544.1-201ENST00000580842 1059 ntBASIC32.21■■■□□ 2.75
PTPRUQ92729 MIR6084-201ENST00000622012 110 ntBASIC32.21■■■□□ 2.75
PTPRUQ92729 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
PTPRUQ92729 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC32.21■■■□□ 2.75
PTPRUQ92729 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC32.2■■■□□ 2.75
PTPRUQ92729 AC123595.1-201ENST00000440769 1046 ntBASIC32.2■■■□□ 2.75
PTPRUQ92729 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC32.2■■■□□ 2.75
PTPRUQ92729 pRNA.6-201ENST00000610482 90 ntBASIC32.2■■■□□ 2.75
PTPRUQ92729 pRNA.5-201ENST00000612139 90 ntBASIC32.2■■■□□ 2.75
PTPRUQ92729 pRNA.11-201ENST00000618423 90 ntBASIC32.2■■■□□ 2.75
PTPRUQ92729 pRNA.13-201ENST00000619112 90 ntBASIC32.2■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms