Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.19■■□□□ 1.46
RFFLQ8WZ73 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RFFLQ8WZ73 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RFFLQ8WZ73 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
RFFLQ8WZ73 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RFFLQ8WZ73 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RFFLQ8WZ73 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RFFLQ8WZ73 AL035685.1-201ENST00000636663 812 ntBASIC24.19■■□□□ 1.46
RFFLQ8WZ73 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RFFLQ8WZ73 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.18■■□□□ 1.46
RFFLQ8WZ73 AC131274.2-201ENST00000580697 1507 ntBASIC24.18■■□□□ 1.46
RFFLQ8WZ73 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
RFFLQ8WZ73 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RFFLQ8WZ73 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
RFFLQ8WZ73 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
RFFLQ8WZ73 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RFFLQ8WZ73 AC022616.5-201ENST00000518796 181 ntBASIC24.17■■□□□ 1.46
RFFLQ8WZ73 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.17■■□□□ 1.46
RFFLQ8WZ73 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RFFLQ8WZ73 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.16■■□□□ 1.46
RFFLQ8WZ73 DUSP8P3-201ENST00000399571 1760 ntBASIC24.16■■□□□ 1.46
RFFLQ8WZ73 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RFFLQ8WZ73 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RFFLQ8WZ73 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
RFFLQ8WZ73 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RFFLQ8WZ73 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.16■■□□□ 1.46
RFFLQ8WZ73 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.16■■□□□ 1.46
RFFLQ8WZ73 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RFFLQ8WZ73 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RFFLQ8WZ73 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.16■■□□□ 1.46
RFFLQ8WZ73 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RFFLQ8WZ73 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RFFLQ8WZ73 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RFFLQ8WZ73 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RFFLQ8WZ73 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RFFLQ8WZ73 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.46
RFFLQ8WZ73 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
RFFLQ8WZ73 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.14■■□□□ 1.46
RFFLQ8WZ73 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
RFFLQ8WZ73 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RFFLQ8WZ73 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RFFLQ8WZ73 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.14■■□□□ 1.45
RFFLQ8WZ73 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RFFLQ8WZ73 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RFFLQ8WZ73 AL451085.2-201ENST00000605085 799 ntBASIC24.14■■□□□ 1.45
RFFLQ8WZ73 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RFFLQ8WZ73 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
RFFLQ8WZ73 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.14■■□□□ 1.45
RFFLQ8WZ73 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
RFFLQ8WZ73 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
RFFLQ8WZ73 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RFFLQ8WZ73 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.13■■□□□ 1.45
RFFLQ8WZ73 AC139795.1-202ENST00000500444 432 ntBASIC24.13■■□□□ 1.45
RFFLQ8WZ73 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.13■■□□□ 1.45
RFFLQ8WZ73 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
RFFLQ8WZ73 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.13■■□□□ 1.45
RFFLQ8WZ73 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RFFLQ8WZ73 ALDH1A3-203ENST00000557963 1670 ntBASIC24.12■■□□□ 1.45
RFFLQ8WZ73 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RFFLQ8WZ73 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
RFFLQ8WZ73 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.12■■□□□ 1.45
RFFLQ8WZ73 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.12■■□□□ 1.45
RFFLQ8WZ73 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.12■■□□□ 1.45
RFFLQ8WZ73 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
RFFLQ8WZ73 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RFFLQ8WZ73 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RFFLQ8WZ73 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RFFLQ8WZ73 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.11■■□□□ 1.45
RFFLQ8WZ73 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.11■■□□□ 1.45
RFFLQ8WZ73 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RFFLQ8WZ73 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.11■■□□□ 1.45
RFFLQ8WZ73 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
RFFLQ8WZ73 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.1■■□□□ 1.45
RFFLQ8WZ73 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RFFLQ8WZ73 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
RFFLQ8WZ73 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RFFLQ8WZ73 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.1■■□□□ 1.45
RFFLQ8WZ73 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 AC074183.2-201ENST00000623112 922 ntBASIC24.09■■□□□ 1.45
RFFLQ8WZ73 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 AC079834.2-201ENST00000609776 1949 ntBASIC24.09■■□□□ 1.45
RFFLQ8WZ73 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
RFFLQ8WZ73 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.08■■□□□ 1.45
RFFLQ8WZ73 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RFFLQ8WZ73 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RFFLQ8WZ73 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RFFLQ8WZ73 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RFFLQ8WZ73 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms