Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
SYNE2Q8WXH0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SYNE2Q8WXH0 SLC7A5P1-201ENST00000568957 537 ntBASIC9.55□□□□□ -0.88
SYNE2Q8WXH0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
SYNE2Q8WXH0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC9.55□□□□□ -0.88
SYNE2Q8WXH0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC9.55□□□□□ -0.88
SYNE2Q8WXH0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC9.55□□□□□ -0.88
SYNE2Q8WXH0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 KRT18P10-201ENST00000388836 1287 ntBASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 ITM2C-210ENST00000620962 501 ntBASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 ARMC10P1-201ENST00000313754 855 ntBASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 AC128676.1-201ENST00000454392 318 ntBASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 SNX5-217ENST00000606557 1087 ntBASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 RARRES2P4-201ENST00000514074 484 ntBASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 GXYLT1P3-201ENST00000453058 1193 ntBASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 MDK-213ENST00000617138 635 ntTSL 2 BASIC9.54□□□□□ -0.88
SYNE2Q8WXH0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 MIR6722-201ENST00000617286 78 ntBASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 AC083906.2-201ENST00000511578 360 ntBASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 IGHV3-19-201ENST00000521488 291 ntBASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SYNE2Q8WXH0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
SYNE2Q8WXH0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
SYNE2Q8WXH0 AC073210.2-201ENST00000430369 194 ntBASIC9.52□□□□□ -0.88
SYNE2Q8WXH0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SYNE2Q8WXH0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 MME-217ENST00000616757 1315 ntTSL 5 BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 AC006455.2-201ENST00000429931 906 ntBASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC9.51□□□□□ -0.89
SYNE2Q8WXH0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SYNE2Q8WXH0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms