Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
ARHGEF40Q8TER5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC34.47■■■■□ 3.11
ARHGEF40Q8TER5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
ARHGEF40Q8TER5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
ARHGEF40Q8TER5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
ARHGEF40Q8TER5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC34.46■■■■□ 3.11
ARHGEF40Q8TER5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC34.46■■■■□ 3.11
ARHGEF40Q8TER5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
ARHGEF40Q8TER5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC34.46■■■■□ 3.11
ARHGEF40Q8TER5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC34.46■■■■□ 3.11
ARHGEF40Q8TER5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC34.45■■■■□ 3.11
ARHGEF40Q8TER5 GXYLT1P5-201ENST00000614548 1189 ntBASIC34.45■■■■□ 3.11
ARHGEF40Q8TER5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC34.45■■■■□ 3.11
ARHGEF40Q8TER5 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
ARHGEF40Q8TER5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC34.45■■■■□ 3.11
ARHGEF40Q8TER5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
ARHGEF40Q8TER5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
ARHGEF40Q8TER5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.1
ARHGEF40Q8TER5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC34.45■■■■□ 3.1
ARHGEF40Q8TER5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC34.45■■■■□ 3.1
ARHGEF40Q8TER5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC34.45■■■■□ 3.1
ARHGEF40Q8TER5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC34.45■■■■□ 3.1
ARHGEF40Q8TER5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
ARHGEF40Q8TER5 AC097639.1-201ENST00000565519 1891 ntBASIC34.44■■■■□ 3.1
ARHGEF40Q8TER5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC34.44■■■■□ 3.1
ARHGEF40Q8TER5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC34.43■■■■□ 3.1
ARHGEF40Q8TER5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
ARHGEF40Q8TER5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC34.43■■■■□ 3.1
ARHGEF40Q8TER5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC34.43■■■■□ 3.1
ARHGEF40Q8TER5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC34.43■■■■□ 3.1
ARHGEF40Q8TER5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
ARHGEF40Q8TER5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
ARHGEF40Q8TER5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
ARHGEF40Q8TER5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
ARHGEF40Q8TER5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC34.42■■■■□ 3.1
ARHGEF40Q8TER5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
ARHGEF40Q8TER5 AC080038.1-201ENST00000611274 1154 ntBASIC34.42■■■■□ 3.1
ARHGEF40Q8TER5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC34.42■■■■□ 3.1
ARHGEF40Q8TER5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC34.41■■■■□ 3.1
ARHGEF40Q8TER5 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
ARHGEF40Q8TER5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC34.41■■■■□ 3.1
ARHGEF40Q8TER5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
ARHGEF40Q8TER5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
ARHGEF40Q8TER5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC34.4■■■■□ 3.1
ARHGEF40Q8TER5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
ARHGEF40Q8TER5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC34.39■■■■□ 3.1
ARHGEF40Q8TER5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC34.39■■■■□ 3.1
ARHGEF40Q8TER5 CDCA4P2-201ENST00000441182 718 ntBASIC34.39■■■■□ 3.1
ARHGEF40Q8TER5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC34.39■■■■□ 3.1
ARHGEF40Q8TER5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
ARHGEF40Q8TER5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
ARHGEF40Q8TER5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
ARHGEF40Q8TER5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
ARHGEF40Q8TER5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC34.38■■■■□ 3.09
ARHGEF40Q8TER5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC34.38■■■■□ 3.09
ARHGEF40Q8TER5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC34.38■■■■□ 3.09
ARHGEF40Q8TER5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC34.38■■■■□ 3.09
ARHGEF40Q8TER5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC34.38■■■■□ 3.09
ARHGEF40Q8TER5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC34.38■■■■□ 3.09
ARHGEF40Q8TER5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 pRNA.6-201ENST00000610482 90 ntBASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 pRNA.5-201ENST00000612139 90 ntBASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 pRNA.11-201ENST00000618423 90 ntBASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 pRNA.13-201ENST00000619112 90 ntBASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC34.37■■■■□ 3.09
ARHGEF40Q8TER5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ARHGEF40Q8TER5 AL355802.2-201ENST00000402069 882 ntBASIC34.36■■■■□ 3.09
ARHGEF40Q8TER5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC34.36■■■■□ 3.09
ARHGEF40Q8TER5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC34.36■■■■□ 3.09
ARHGEF40Q8TER5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC34.36■■■■□ 3.09
ARHGEF40Q8TER5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
ARHGEF40Q8TER5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC34.36■■■■□ 3.09
ARHGEF40Q8TER5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC34.35■■■■□ 3.09
ARHGEF40Q8TER5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC34.35■■■■□ 3.09
ARHGEF40Q8TER5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC34.35■■■■□ 3.09
ARHGEF40Q8TER5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC34.35■■■■□ 3.09
ARHGEF40Q8TER5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC34.35■■■■□ 3.09
ARHGEF40Q8TER5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
ARHGEF40Q8TER5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC34.35■■■■□ 3.09
ARHGEF40Q8TER5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
ARHGEF40Q8TER5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
ARHGEF40Q8TER5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
ARHGEF40Q8TER5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC34.35■■■■□ 3.09
ARHGEF40Q8TER5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC34.35■■■■□ 3.09
ARHGEF40Q8TER5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
ARHGEF40Q8TER5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC34.34■■■■□ 3.09
ARHGEF40Q8TER5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
ARHGEF40Q8TER5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
ARHGEF40Q8TER5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
ARHGEF40Q8TER5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
ARHGEF40Q8TER5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC34.34■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms