Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RDH11Q8TC12 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.43■■□□□ 1.18
RDH11Q8TC12 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.43■■□□□ 1.18
RDH11Q8TC12 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RDH11Q8TC12 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RDH11Q8TC12 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RDH11Q8TC12 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RDH11Q8TC12 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
RDH11Q8TC12 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RDH11Q8TC12 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RDH11Q8TC12 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.41■■□□□ 1.18
RDH11Q8TC12 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
RDH11Q8TC12 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RDH11Q8TC12 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RDH11Q8TC12 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.41■■□□□ 1.18
RDH11Q8TC12 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.41■■□□□ 1.18
RDH11Q8TC12 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.41■■□□□ 1.18
RDH11Q8TC12 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RDH11Q8TC12 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RDH11Q8TC12 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RDH11Q8TC12 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RDH11Q8TC12 ABHD17AP5-201ENST00000580133 923 ntBASIC22.4■■□□□ 1.18
RDH11Q8TC12 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RDH11Q8TC12 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
RDH11Q8TC12 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
RDH11Q8TC12 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RDH11Q8TC12 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RDH11Q8TC12 ALDH1A3-203ENST00000557963 1670 ntBASIC22.39■■□□□ 1.18
RDH11Q8TC12 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RDH11Q8TC12 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
RDH11Q8TC12 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
RDH11Q8TC12 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RDH11Q8TC12 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.18
RDH11Q8TC12 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.39■■□□□ 1.18
RDH11Q8TC12 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RDH11Q8TC12 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RDH11Q8TC12 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
RDH11Q8TC12 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RDH11Q8TC12 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RDH11Q8TC12 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RDH11Q8TC12 AC131274.2-201ENST00000580697 1507 ntBASIC22.38■■□□□ 1.17
RDH11Q8TC12 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
RDH11Q8TC12 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RDH11Q8TC12 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RDH11Q8TC12 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.38■■□□□ 1.17
RDH11Q8TC12 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.38■■□□□ 1.17
RDH11Q8TC12 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RDH11Q8TC12 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.38■■□□□ 1.17
RDH11Q8TC12 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
RDH11Q8TC12 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.37■■□□□ 1.17
RDH11Q8TC12 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RDH11Q8TC12 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RDH11Q8TC12 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.37■■□□□ 1.17
RDH11Q8TC12 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RDH11Q8TC12 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.37■■□□□ 1.17
RDH11Q8TC12 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RDH11Q8TC12 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RDH11Q8TC12 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RDH11Q8TC12 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RDH11Q8TC12 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RDH11Q8TC12 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RDH11Q8TC12 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RDH11Q8TC12 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RDH11Q8TC12 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RDH11Q8TC12 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RDH11Q8TC12 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RDH11Q8TC12 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.36■■□□□ 1.17
RDH11Q8TC12 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.36■■□□□ 1.17
RDH11Q8TC12 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
RDH11Q8TC12 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
RDH11Q8TC12 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RDH11Q8TC12 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
RDH11Q8TC12 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RDH11Q8TC12 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RDH11Q8TC12 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
RDH11Q8TC12 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
RDH11Q8TC12 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
RDH11Q8TC12 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
RDH11Q8TC12 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
RDH11Q8TC12 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RDH11Q8TC12 C1orf229-201ENST00000623686 2258 ntBASIC22.35■■□□□ 1.17
RDH11Q8TC12 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.35■■□□□ 1.17
RDH11Q8TC12 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RDH11Q8TC12 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
RDH11Q8TC12 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.34■■□□□ 1.17
RDH11Q8TC12 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.34■■□□□ 1.17
RDH11Q8TC12 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RDH11Q8TC12 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RDH11Q8TC12 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.34■■□□□ 1.17
RDH11Q8TC12 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RDH11Q8TC12 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RDH11Q8TC12 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RDH11Q8TC12 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RDH11Q8TC12 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.33■■□□□ 1.17
RDH11Q8TC12 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RDH11Q8TC12 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
RDH11Q8TC12 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
RDH11Q8TC12 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
RDH11Q8TC12 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.32■■□□□ 1.16
RDH11Q8TC12 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms