Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.95■□□□□ 0.78
DNAAF1Q8NEP3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
DNAAF1Q8NEP3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNAAF1Q8NEP3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNAAF1Q8NEP3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
DNAAF1Q8NEP3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.94■□□□□ 0.78
DNAAF1Q8NEP3 RARRES2P2-201ENST00000394842 485 ntBASIC19.94■□□□□ 0.78
DNAAF1Q8NEP3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DNAAF1Q8NEP3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNAAF1Q8NEP3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNAAF1Q8NEP3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
DNAAF1Q8NEP3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNAAF1Q8NEP3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
DNAAF1Q8NEP3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 AC233723.2-201ENST00000623798 2106 ntBASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 ANOS2P-203ENST00000472227 1816 ntBASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 AC087393.1-201ENST00000582896 145 ntBASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
DNAAF1Q8NEP3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.92■□□□□ 0.78
DNAAF1Q8NEP3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNAAF1Q8NEP3 SPCS2P3-201ENST00000500401 656 ntBASIC19.92■□□□□ 0.78
DNAAF1Q8NEP3 MIR6765-201ENST00000614092 87 ntBASIC19.92■□□□□ 0.78
DNAAF1Q8NEP3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNAAF1Q8NEP3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNAAF1Q8NEP3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNAAF1Q8NEP3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
DNAAF1Q8NEP3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNAAF1Q8NEP3 EP400NL-214ENST00000641289 2402 ntBASIC19.92■□□□□ 0.78
DNAAF1Q8NEP3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DNAAF1Q8NEP3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNAAF1Q8NEP3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
DNAAF1Q8NEP3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.91■□□□□ 0.78
DNAAF1Q8NEP3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.91■□□□□ 0.78
DNAAF1Q8NEP3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNAAF1Q8NEP3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNAAF1Q8NEP3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.91■□□□□ 0.78
DNAAF1Q8NEP3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNAAF1Q8NEP3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNAAF1Q8NEP3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNAAF1Q8NEP3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
DNAAF1Q8NEP3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNAAF1Q8NEP3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNAAF1Q8NEP3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.9■□□□□ 0.78
DNAAF1Q8NEP3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNAAF1Q8NEP3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.9■□□□□ 0.78
DNAAF1Q8NEP3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
DNAAF1Q8NEP3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DNAAF1Q8NEP3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DNAAF1Q8NEP3 AL592295.1-201ENST00000400984 884 ntBASIC19.89■□□□□ 0.77
DNAAF1Q8NEP3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DNAAF1Q8NEP3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DNAAF1Q8NEP3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.89■□□□□ 0.77
DNAAF1Q8NEP3 HSD17B1P1-201ENST00000590052 955 ntBASIC19.89■□□□□ 0.77
DNAAF1Q8NEP3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
DNAAF1Q8NEP3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.88■□□□□ 0.77
DNAAF1Q8NEP3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNAAF1Q8NEP3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNAAF1Q8NEP3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNAAF1Q8NEP3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.88■□□□□ 0.77
DNAAF1Q8NEP3 DUX4L9-201ENST00000449051 1259 ntBASIC19.88■□□□□ 0.77
DNAAF1Q8NEP3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
DNAAF1Q8NEP3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.88■□□□□ 0.77
DNAAF1Q8NEP3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNAAF1Q8NEP3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
DNAAF1Q8NEP3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNAAF1Q8NEP3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 C1orf229-201ENST00000623686 2258 ntBASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 AC090877.2-201ENST00000558441 1738 ntBASIC19.87■□□□□ 0.77
DNAAF1Q8NEP3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms