Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.12■■□□□ 1.77
SHCBP1Q8NEM2 AC009086.3-201ENST00000623486 1008 ntBASIC26.12■■□□□ 1.77
SHCBP1Q8NEM2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
SHCBP1Q8NEM2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
SHCBP1Q8NEM2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SHCBP1Q8NEM2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SHCBP1Q8NEM2 BX842568.3-201ENST00000418104 571 ntBASIC26.11■■□□□ 1.77
SHCBP1Q8NEM2 MIR3181-201ENST00000578512 73 ntBASIC26.11■■□□□ 1.77
SHCBP1Q8NEM2 AC087623.3-201ENST00000607047 1098 ntBASIC26.11■■□□□ 1.77
SHCBP1Q8NEM2 AC233992.3-201ENST00000607491 485 ntBASIC26.11■■□□□ 1.77
SHCBP1Q8NEM2 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.11■■□□□ 1.77
SHCBP1Q8NEM2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.1■■□□□ 1.77
SHCBP1Q8NEM2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SHCBP1Q8NEM2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SHCBP1Q8NEM2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SHCBP1Q8NEM2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SHCBP1Q8NEM2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.1■■□□□ 1.77
SHCBP1Q8NEM2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
SHCBP1Q8NEM2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SHCBP1Q8NEM2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SHCBP1Q8NEM2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
SHCBP1Q8NEM2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SHCBP1Q8NEM2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SHCBP1Q8NEM2 AC145676.1-201ENST00000514988 2004 ntBASIC26.09■■□□□ 1.77
SHCBP1Q8NEM2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
SHCBP1Q8NEM2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SHCBP1Q8NEM2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SHCBP1Q8NEM2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
SHCBP1Q8NEM2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.09■■□□□ 1.77
SHCBP1Q8NEM2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SHCBP1Q8NEM2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SHCBP1Q8NEM2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SHCBP1Q8NEM2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.08■■□□□ 1.77
SHCBP1Q8NEM2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
SHCBP1Q8NEM2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
SHCBP1Q8NEM2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
SHCBP1Q8NEM2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SHCBP1Q8NEM2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SHCBP1Q8NEM2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SHCBP1Q8NEM2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SHCBP1Q8NEM2 AC091060.1-201ENST00000623524 1766 ntBASIC26.07■■□□□ 1.76
SHCBP1Q8NEM2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.07■■□□□ 1.76
SHCBP1Q8NEM2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SHCBP1Q8NEM2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SHCBP1Q8NEM2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SHCBP1Q8NEM2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.07■■□□□ 1.76
SHCBP1Q8NEM2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.07■■□□□ 1.76
SHCBP1Q8NEM2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.07■■□□□ 1.76
SHCBP1Q8NEM2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SHCBP1Q8NEM2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SHCBP1Q8NEM2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SHCBP1Q8NEM2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SHCBP1Q8NEM2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.06■■□□□ 1.76
SHCBP1Q8NEM2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SHCBP1Q8NEM2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SHCBP1Q8NEM2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SHCBP1Q8NEM2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.06■■□□□ 1.76
SHCBP1Q8NEM2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SHCBP1Q8NEM2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SHCBP1Q8NEM2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.06■■□□□ 1.76
SHCBP1Q8NEM2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SHCBP1Q8NEM2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.05■■□□□ 1.76
SHCBP1Q8NEM2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SHCBP1Q8NEM2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.05■■□□□ 1.76
SHCBP1Q8NEM2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.05■■□□□ 1.76
SHCBP1Q8NEM2 AL162430.1-201ENST00000480705 870 ntBASIC26.05■■□□□ 1.76
SHCBP1Q8NEM2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.05■■□□□ 1.76
SHCBP1Q8NEM2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.05■■□□□ 1.76
SHCBP1Q8NEM2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.05■■□□□ 1.76
SHCBP1Q8NEM2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.05■■□□□ 1.76
SHCBP1Q8NEM2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
SHCBP1Q8NEM2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SHCBP1Q8NEM2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.04■■□□□ 1.76
SHCBP1Q8NEM2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.04■■□□□ 1.76
SHCBP1Q8NEM2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SHCBP1Q8NEM2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SHCBP1Q8NEM2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SHCBP1Q8NEM2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.04■■□□□ 1.76
SHCBP1Q8NEM2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
SHCBP1Q8NEM2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SHCBP1Q8NEM2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.03■■□□□ 1.76
SHCBP1Q8NEM2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SHCBP1Q8NEM2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.02■■□□□ 1.76
SHCBP1Q8NEM2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.02■■□□□ 1.76
SHCBP1Q8NEM2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.02■■□□□ 1.76
SHCBP1Q8NEM2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SHCBP1Q8NEM2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SHCBP1Q8NEM2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SHCBP1Q8NEM2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SHCBP1Q8NEM2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.01■■□□□ 1.75
SHCBP1Q8NEM2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.01■■□□□ 1.75
SHCBP1Q8NEM2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.01■■□□□ 1.75
SHCBP1Q8NEM2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.01■■□□□ 1.75
SHCBP1Q8NEM2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26■■□□□ 1.75
SHCBP1Q8NEM2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
SHCBP1Q8NEM2 HLA-L-211ENST00000482052 1765 ntBASIC26■■□□□ 1.75
SHCBP1Q8NEM2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26■■□□□ 1.75
SHCBP1Q8NEM2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26■■□□□ 1.75
SHCBP1Q8NEM2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26■■□□□ 1.75
SHCBP1Q8NEM2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms