Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 Z92544.1-202ENST00000571933 1220 ntBASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.18■□□□□ 0.98
CDRT4Q8N9R6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDRT4Q8N9R6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDRT4Q8N9R6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.17■□□□□ 0.98
CDRT4Q8N9R6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDRT4Q8N9R6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDRT4Q8N9R6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDRT4Q8N9R6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDRT4Q8N9R6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDRT4Q8N9R6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CDRT4Q8N9R6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDRT4Q8N9R6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDRT4Q8N9R6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CDRT4Q8N9R6 KRT125P-201ENST00000546827 989 ntBASIC21.16■□□□□ 0.98
CDRT4Q8N9R6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDRT4Q8N9R6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDRT4Q8N9R6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDRT4Q8N9R6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDRT4Q8N9R6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CDRT4Q8N9R6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDRT4Q8N9R6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.15■□□□□ 0.98
CDRT4Q8N9R6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDRT4Q8N9R6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.15■□□□□ 0.98
CDRT4Q8N9R6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDRT4Q8N9R6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDRT4Q8N9R6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDRT4Q8N9R6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDRT4Q8N9R6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CDRT4Q8N9R6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.14■□□□□ 0.97
CDRT4Q8N9R6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.14■□□□□ 0.97
CDRT4Q8N9R6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.13■□□□□ 0.97
CDRT4Q8N9R6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDRT4Q8N9R6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDRT4Q8N9R6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.13■□□□□ 0.97
CDRT4Q8N9R6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDRT4Q8N9R6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.13■□□□□ 0.97
CDRT4Q8N9R6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.13■□□□□ 0.97
CDRT4Q8N9R6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDRT4Q8N9R6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDRT4Q8N9R6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDRT4Q8N9R6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDRT4Q8N9R6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 AC009299.2-201ENST00000482477 511 ntBASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 AL451085.2-201ENST00000605085 799 ntBASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDRT4Q8N9R6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 MIR6722-201ENST00000617286 78 ntBASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.11■□□□□ 0.97
CDRT4Q8N9R6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 AC092028.1-203ENST00000608262 953 ntBASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDRT4Q8N9R6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDRT4Q8N9R6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CDRT4Q8N9R6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.09■□□□□ 0.97
CDRT4Q8N9R6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDRT4Q8N9R6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDRT4Q8N9R6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDRT4Q8N9R6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDRT4Q8N9R6 MIR4787-201ENST00000607364 84 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms