Protein–RNA interactions for Protein: Q8N9R0

LINC00304, Putative uncharacterized protein encoded by LINC00304, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304Q8N9R0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LINC00304Q8N9R0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00304Q8N9R0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00304Q8N9R0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00304Q8N9R0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00304Q8N9R0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00304Q8N9R0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
LINC00304Q8N9R0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00304Q8N9R0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC00304Q8N9R0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC00304Q8N9R0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00304Q8N9R0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00304Q8N9R0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00304Q8N9R0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00304Q8N9R0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00304Q8N9R0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00304Q8N9R0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LINC00304Q8N9R0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 AL117332.1-201ENST00000622628 974 ntBASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC00304Q8N9R0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00304Q8N9R0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 AC141586.4-201ENST00000624558 1573 ntBASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 MIR3621-201ENST00000580529 85 ntBASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 AC008406.3-201ENST00000620001 1374 ntBASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00304Q8N9R0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00304Q8N9R0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00304Q8N9R0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00304Q8N9R0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00304Q8N9R0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00304Q8N9R0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00304Q8N9R0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC13.28□□□□□ -0.28
LINC00304Q8N9R0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
LINC00304Q8N9R0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
LINC00304Q8N9R0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00304Q8N9R0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms