Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EXD3Q8N9H8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
EXD3Q8N9H8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
EXD3Q8N9H8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
EXD3Q8N9H8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
EXD3Q8N9H8 SERBP1P1-201ENST00000396021 1160 ntBASIC21.42■■□□□ 1.02
EXD3Q8N9H8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
EXD3Q8N9H8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
EXD3Q8N9H8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.42■■□□□ 1.02
EXD3Q8N9H8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.42■■□□□ 1.02
EXD3Q8N9H8 AC027682.1-201ENST00000562846 899 ntBASIC21.42■■□□□ 1.02
EXD3Q8N9H8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.42■■□□□ 1.02
EXD3Q8N9H8 AC008764.7-201ENST00000593779 1081 ntBASIC21.42■■□□□ 1.02
EXD3Q8N9H8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
EXD3Q8N9H8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
EXD3Q8N9H8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
EXD3Q8N9H8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EXD3Q8N9H8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
EXD3Q8N9H8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.41■■□□□ 1.02
EXD3Q8N9H8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
EXD3Q8N9H8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.41■■□□□ 1.02
EXD3Q8N9H8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.41■■□□□ 1.02
EXD3Q8N9H8 AC022517.1-201ENST00000592429 346 ntBASIC21.41■■□□□ 1.02
EXD3Q8N9H8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
EXD3Q8N9H8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
EXD3Q8N9H8 AC138932.3-201ENST00000567634 1902 ntBASIC21.41■■□□□ 1.02
EXD3Q8N9H8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.4■■□□□ 1.02
EXD3Q8N9H8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
EXD3Q8N9H8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EXD3Q8N9H8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
EXD3Q8N9H8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.4■■□□□ 1.02
EXD3Q8N9H8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
EXD3Q8N9H8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.4■■□□□ 1.02
EXD3Q8N9H8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
EXD3Q8N9H8 AC090877.2-201ENST00000558441 1738 ntBASIC21.4■■□□□ 1.02
EXD3Q8N9H8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.39■■□□□ 1.01
EXD3Q8N9H8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EXD3Q8N9H8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.39■■□□□ 1.01
EXD3Q8N9H8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.39■■□□□ 1.01
EXD3Q8N9H8 AC092171.4-201ENST00000609130 632 ntBASIC21.39■■□□□ 1.01
EXD3Q8N9H8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
EXD3Q8N9H8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
EXD3Q8N9H8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD3Q8N9H8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.38■■□□□ 1.01
EXD3Q8N9H8 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.38■■□□□ 1.01
EXD3Q8N9H8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
EXD3Q8N9H8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD3Q8N9H8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD3Q8N9H8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD3Q8N9H8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD3Q8N9H8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.38■■□□□ 1.01
EXD3Q8N9H8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD3Q8N9H8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
EXD3Q8N9H8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
EXD3Q8N9H8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EXD3Q8N9H8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
EXD3Q8N9H8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EXD3Q8N9H8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.37■■□□□ 1.01
EXD3Q8N9H8 AC099791.1-201ENST00000416440 715 ntBASIC21.37■■□□□ 1.01
EXD3Q8N9H8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.37■■□□□ 1.01
EXD3Q8N9H8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
EXD3Q8N9H8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.36■■□□□ 1.01
EXD3Q8N9H8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
EXD3Q8N9H8 AL137784.2-201ENST00000607332 1000 ntBASIC21.36■■□□□ 1.01
EXD3Q8N9H8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.36■■□□□ 1.01
EXD3Q8N9H8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EXD3Q8N9H8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.36■■□□□ 1.01
EXD3Q8N9H8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.36■■□□□ 1.01
EXD3Q8N9H8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
EXD3Q8N9H8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
EXD3Q8N9H8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.35■■□□□ 1.01
EXD3Q8N9H8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EXD3Q8N9H8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.35■■□□□ 1.01
EXD3Q8N9H8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.35■■□□□ 1.01
EXD3Q8N9H8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.35■■□□□ 1.01
EXD3Q8N9H8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.35■■□□□ 1.01
EXD3Q8N9H8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EXD3Q8N9H8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EXD3Q8N9H8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EXD3Q8N9H8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EXD3Q8N9H8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EXD3Q8N9H8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EXD3Q8N9H8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
EXD3Q8N9H8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EXD3Q8N9H8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EXD3Q8N9H8 AC034268.1-201ENST00000441047 882 ntBASIC21.34■■□□□ 1.01
EXD3Q8N9H8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.34■■□□□ 1.01
EXD3Q8N9H8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.34■■□□□ 1.01
EXD3Q8N9H8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EXD3Q8N9H8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms