Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC44A3Q8N4M1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC44A3Q8N4M1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC44A3Q8N4M1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.53■■□□□ 1.36
SLC44A3Q8N4M1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC44A3Q8N4M1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC44A3Q8N4M1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC44A3Q8N4M1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.53■■□□□ 1.36
SLC44A3Q8N4M1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SLC44A3Q8N4M1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.52■■□□□ 1.36
SLC44A3Q8N4M1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SLC44A3Q8N4M1 AC126544.1-201ENST00000580842 1059 ntBASIC23.52■■□□□ 1.36
SLC44A3Q8N4M1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.52■■□□□ 1.36
SLC44A3Q8N4M1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
SLC44A3Q8N4M1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.52■■□□□ 1.36
SLC44A3Q8N4M1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SLC44A3Q8N4M1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.51■■□□□ 1.35
SLC44A3Q8N4M1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.51■■□□□ 1.35
SLC44A3Q8N4M1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC44A3Q8N4M1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.51■■□□□ 1.35
SLC44A3Q8N4M1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.51■■□□□ 1.35
SLC44A3Q8N4M1 AC092437.1-201ENST00000624794 1048 ntBASIC23.51■■□□□ 1.35
SLC44A3Q8N4M1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC44A3Q8N4M1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC44A3Q8N4M1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC44A3Q8N4M1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC44A3Q8N4M1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC44A3Q8N4M1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.5■■□□□ 1.35
SLC44A3Q8N4M1 SLC47A1P1-202ENST00000449666 945 ntBASIC23.5■■□□□ 1.35
SLC44A3Q8N4M1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.5■■□□□ 1.35
SLC44A3Q8N4M1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC44A3Q8N4M1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC44A3Q8N4M1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC44A3Q8N4M1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 DUX4L2-201ENST00000561772 1275 ntBASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 DUX4L6-201ENST00000626483 1275 ntBASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 DUX4L1-201ENST00000627662 1275 ntBASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 DUX4L8-201ENST00000629013 1275 ntBASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 DUX4L3-201ENST00000630187 1275 ntBASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 DUX4L7-201ENST00000630678 1275 ntBASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 DUX4L5-201ENST00000630834 1275 ntBASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SLC44A3Q8N4M1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.48■■□□□ 1.35
SLC44A3Q8N4M1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A3Q8N4M1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SLC44A3Q8N4M1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A3Q8N4M1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.47■■□□□ 1.35
SLC44A3Q8N4M1 SLC6A10P-202ENST00000431994 2058 ntBASIC23.47■■□□□ 1.35
SLC44A3Q8N4M1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A3Q8N4M1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
SLC44A3Q8N4M1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.47■■□□□ 1.35
SLC44A3Q8N4M1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
SLC44A3Q8N4M1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
SLC44A3Q8N4M1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.47■■□□□ 1.35
SLC44A3Q8N4M1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.47■■□□□ 1.35
SLC44A3Q8N4M1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.47■■□□□ 1.35
SLC44A3Q8N4M1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SLC44A3Q8N4M1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.46■■□□□ 1.35
SLC44A3Q8N4M1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SLC44A3Q8N4M1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SLC44A3Q8N4M1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.46■■□□□ 1.35
SLC44A3Q8N4M1 TSPY26P-201ENST00000476365 1326 ntBASIC23.46■■□□□ 1.35
SLC44A3Q8N4M1 pRNA.6-201ENST00000610482 90 ntBASIC23.46■■□□□ 1.35
SLC44A3Q8N4M1 pRNA.5-201ENST00000612139 90 ntBASIC23.46■■□□□ 1.35
SLC44A3Q8N4M1 pRNA.11-201ENST00000618423 90 ntBASIC23.46■■□□□ 1.35
SLC44A3Q8N4M1 pRNA.13-201ENST00000619112 90 ntBASIC23.46■■□□□ 1.35
SLC44A3Q8N4M1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
SLC44A3Q8N4M1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
SLC44A3Q8N4M1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SLC44A3Q8N4M1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.45■■□□□ 1.34
SLC44A3Q8N4M1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.45■■□□□ 1.34
SLC44A3Q8N4M1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.45■■□□□ 1.34
SLC44A3Q8N4M1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.45■■□□□ 1.34
SLC44A3Q8N4M1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.45■■□□□ 1.34
SLC44A3Q8N4M1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SLC44A3Q8N4M1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms