Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
FBXO39Q8N4B4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
FBXO39Q8N4B4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.7■■□□□ 1.22
FBXO39Q8N4B4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 AC090877.2-201ENST00000558441 1738 ntBASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 AC131281.2-201ENST00000520478 145 ntBASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 AL139246.5-201ENST00000606645 996 ntBASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
FBXO39Q8N4B4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
FBXO39Q8N4B4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.68■■□□□ 1.22
FBXO39Q8N4B4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
FBXO39Q8N4B4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FBXO39Q8N4B4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.68■■□□□ 1.22
FBXO39Q8N4B4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.68■■□□□ 1.22
FBXO39Q8N4B4 MTDHP2-201ENST00000601468 714 ntBASIC22.68■■□□□ 1.22
FBXO39Q8N4B4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
FBXO39Q8N4B4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FBXO39Q8N4B4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.67■■□□□ 1.22
FBXO39Q8N4B4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FBXO39Q8N4B4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.67■■□□□ 1.22
FBXO39Q8N4B4 AL136116.3-201ENST00000402907 1138 ntBASIC22.67■■□□□ 1.22
FBXO39Q8N4B4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.67■■□□□ 1.22
FBXO39Q8N4B4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
FBXO39Q8N4B4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.67■■□□□ 1.22
FBXO39Q8N4B4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
FBXO39Q8N4B4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.66■■□□□ 1.22
FBXO39Q8N4B4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FBXO39Q8N4B4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FBXO39Q8N4B4 AC011551.1-201ENST00000614101 683 ntBASIC22.66■■□□□ 1.22
FBXO39Q8N4B4 MIR6724-1-201ENST00000616420 92 ntBASIC22.66■■□□□ 1.22
FBXO39Q8N4B4 MIR6724-2-201ENST00000616483 92 ntBASIC22.66■■□□□ 1.22
FBXO39Q8N4B4 MIR6724-4-201ENST00000617390 92 ntBASIC22.66■■□□□ 1.22
FBXO39Q8N4B4 MIR6724-3-201ENST00000622482 92 ntBASIC22.66■■□□□ 1.22
FBXO39Q8N4B4 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.66■■□□□ 1.22
FBXO39Q8N4B4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FBXO39Q8N4B4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
FBXO39Q8N4B4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FBXO39Q8N4B4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
FBXO39Q8N4B4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.65■■□□□ 1.22
FBXO39Q8N4B4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.65■■□□□ 1.22
FBXO39Q8N4B4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.65■■□□□ 1.22
FBXO39Q8N4B4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.65■■□□□ 1.22
FBXO39Q8N4B4 AL117332.1-201ENST00000622628 974 ntBASIC22.65■■□□□ 1.22
FBXO39Q8N4B4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
FBXO39Q8N4B4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.65■■□□□ 1.22
FBXO39Q8N4B4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
FBXO39Q8N4B4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.64■■□□□ 1.22
FBXO39Q8N4B4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.22
FBXO39Q8N4B4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FBXO39Q8N4B4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
FBXO39Q8N4B4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.64■■□□□ 1.21
FBXO39Q8N4B4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.64■■□□□ 1.21
FBXO39Q8N4B4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.64■■□□□ 1.21
FBXO39Q8N4B4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
FBXO39Q8N4B4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
FBXO39Q8N4B4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.64■■□□□ 1.21
FBXO39Q8N4B4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.64■■□□□ 1.21
FBXO39Q8N4B4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 AL356740.2-201ENST00000601559 647 ntBASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.63■■□□□ 1.21
FBXO39Q8N4B4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.62■■□□□ 1.21
FBXO39Q8N4B4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FBXO39Q8N4B4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FBXO39Q8N4B4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.62■■□□□ 1.21
FBXO39Q8N4B4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
FBXO39Q8N4B4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FBXO39Q8N4B4 MIR3621-201ENST00000580529 85 ntBASIC22.62■■□□□ 1.21
FBXO39Q8N4B4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FBXO39Q8N4B4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
FBXO39Q8N4B4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.62■■□□□ 1.21
FBXO39Q8N4B4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FBXO39Q8N4B4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
FBXO39Q8N4B4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
FBXO39Q8N4B4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
FBXO39Q8N4B4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
FBXO39Q8N4B4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
FBXO39Q8N4B4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.61■■□□□ 1.21
FBXO39Q8N4B4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.61■■□□□ 1.21
FBXO39Q8N4B4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms