Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CCDC116Q8IYX3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CCDC116Q8IYX3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC116Q8IYX3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC116Q8IYX3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CCDC116Q8IYX3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 AC021242.3-201ENST00000607598 1377 ntBASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCDC116Q8IYX3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC116Q8IYX3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC116Q8IYX3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CCDC116Q8IYX3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CCDC116Q8IYX3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.42■■□□□ 1.02
CCDC116Q8IYX3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC116Q8IYX3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CCDC116Q8IYX3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC116Q8IYX3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC116Q8IYX3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC116Q8IYX3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC116Q8IYX3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC116Q8IYX3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC116Q8IYX3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC116Q8IYX3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC116Q8IYX3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CCDC116Q8IYX3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC116Q8IYX3 AL451085.2-201ENST00000605085 799 ntBASIC21.41■■□□□ 1.02
CCDC116Q8IYX3 SNX5-217ENST00000606557 1087 ntBASIC21.41■■□□□ 1.02
CCDC116Q8IYX3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.41■■□□□ 1.02
CCDC116Q8IYX3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC116Q8IYX3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC116Q8IYX3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC116Q8IYX3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC116Q8IYX3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC116Q8IYX3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC116Q8IYX3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CCDC116Q8IYX3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC116Q8IYX3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC116Q8IYX3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC116Q8IYX3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC116Q8IYX3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CCDC116Q8IYX3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC116Q8IYX3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC116Q8IYX3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC116Q8IYX3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC116Q8IYX3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC116Q8IYX3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC116Q8IYX3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC116Q8IYX3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC116Q8IYX3 AC009299.2-201ENST00000482477 511 ntBASIC21.39■■□□□ 1.01
CCDC116Q8IYX3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC116Q8IYX3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC116Q8IYX3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC116Q8IYX3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC116Q8IYX3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC116Q8IYX3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 AC239859.2-201ENST00000444165 318 ntBASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 KRT125P-201ENST00000546827 989 ntBASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC116Q8IYX3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCDC116Q8IYX3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC116Q8IYX3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCDC116Q8IYX3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC116Q8IYX3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC116Q8IYX3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC116Q8IYX3 Z92544.1-202ENST00000571933 1220 ntBASIC21.37■■□□□ 1.01
CCDC116Q8IYX3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC116Q8IYX3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCDC116Q8IYX3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC116Q8IYX3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC116Q8IYX3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC116Q8IYX3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.36■■□□□ 1.01
CCDC116Q8IYX3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms