Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 SLC6A10P-202ENST00000431994 2058 ntBASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 BX842568.3-201ENST00000418104 571 ntBASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 AC006455.2-201ENST00000429931 906 ntBASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 AC092171.4-201ENST00000609130 632 ntBASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.61■□□□□ 0.89
RP1L1Q8IWN7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.6■□□□□ 0.89
RP1L1Q8IWN7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RP1L1Q8IWN7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.6■□□□□ 0.89
RP1L1Q8IWN7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RP1L1Q8IWN7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RP1L1Q8IWN7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.6■□□□□ 0.89
RP1L1Q8IWN7 AL358852.1-201ENST00000623174 1268 ntBASIC20.6■□□□□ 0.89
RP1L1Q8IWN7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RP1L1Q8IWN7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.6■□□□□ 0.89
RP1L1Q8IWN7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 AC136469.2-201ENST00000623944 1028 ntBASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.59■□□□□ 0.89
RP1L1Q8IWN7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RP1L1Q8IWN7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RP1L1Q8IWN7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RP1L1Q8IWN7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.58■□□□□ 0.89
RP1L1Q8IWN7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
RP1L1Q8IWN7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RP1L1Q8IWN7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.88
RP1L1Q8IWN7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.58■□□□□ 0.88
RP1L1Q8IWN7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RP1L1Q8IWN7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.58■□□□□ 0.88
RP1L1Q8IWN7 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.58■□□□□ 0.88
RP1L1Q8IWN7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RP1L1Q8IWN7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.57■□□□□ 0.88
RP1L1Q8IWN7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RP1L1Q8IWN7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RP1L1Q8IWN7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.57■□□□□ 0.88
RP1L1Q8IWN7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RP1L1Q8IWN7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RP1L1Q8IWN7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RP1L1Q8IWN7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RP1L1Q8IWN7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RP1L1Q8IWN7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RP1L1Q8IWN7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RP1L1Q8IWN7 AL137784.2-201ENST00000607332 1000 ntBASIC20.56■□□□□ 0.88
RP1L1Q8IWN7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
RP1L1Q8IWN7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RP1L1Q8IWN7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.56■□□□□ 0.88
RP1L1Q8IWN7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RP1L1Q8IWN7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RP1L1Q8IWN7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.56■□□□□ 0.88
RP1L1Q8IWN7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RP1L1Q8IWN7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RP1L1Q8IWN7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.56■□□□□ 0.88
RP1L1Q8IWN7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
RP1L1Q8IWN7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RP1L1Q8IWN7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.55■□□□□ 0.88
RP1L1Q8IWN7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.55■□□□□ 0.88
RP1L1Q8IWN7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RP1L1Q8IWN7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RP1L1Q8IWN7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.55■□□□□ 0.88
RP1L1Q8IWN7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RP1L1Q8IWN7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RP1L1Q8IWN7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RP1L1Q8IWN7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.55■□□□□ 0.88
RP1L1Q8IWN7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RP1L1Q8IWN7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RP1L1Q8IWN7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.54■□□□□ 0.88
RP1L1Q8IWN7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.54■□□□□ 0.88
RP1L1Q8IWN7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.54■□□□□ 0.88
RP1L1Q8IWN7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RP1L1Q8IWN7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.54■□□□□ 0.88
RP1L1Q8IWN7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RP1L1Q8IWN7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms