Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 C9orf163-202ENST00000624034 2573 ntBASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.13■□□□□ 0.81
LINC00346Q8IVM7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 KRT18P24-201ENST00000344739 1156 ntBASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00346Q8IVM7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC00346Q8IVM7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC00346Q8IVM7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LINC00346Q8IVM7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LINC00346Q8IVM7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.11■□□□□ 0.81
LINC00346Q8IVM7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.11■□□□□ 0.81
LINC00346Q8IVM7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.11■□□□□ 0.81
LINC00346Q8IVM7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC00346Q8IVM7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC00346Q8IVM7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.11■□□□□ 0.81
LINC00346Q8IVM7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.11■□□□□ 0.81
LINC00346Q8IVM7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.1■□□□□ 0.81
LINC00346Q8IVM7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC00346Q8IVM7 AF131216.4-201ENST00000638924 1588 ntBASIC20.1■□□□□ 0.81
LINC00346Q8IVM7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC00346Q8IVM7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LINC00346Q8IVM7 AC068473.5-201ENST00000616428 2072 ntBASIC20.1■□□□□ 0.81
LINC00346Q8IVM7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC00346Q8IVM7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.09■□□□□ 0.81
LINC00346Q8IVM7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00346Q8IVM7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00346Q8IVM7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00346Q8IVM7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00346Q8IVM7 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.09■□□□□ 0.81
LINC00346Q8IVM7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.09■□□□□ 0.81
LINC00346Q8IVM7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.09■□□□□ 0.81
LINC00346Q8IVM7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00346Q8IVM7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.09■□□□□ 0.81
LINC00346Q8IVM7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LINC00346Q8IVM7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.09■□□□□ 0.81
LINC00346Q8IVM7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00346Q8IVM7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINC00346Q8IVM7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
LINC00346Q8IVM7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
LINC00346Q8IVM7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
LINC00346Q8IVM7 AC103834.1-201ENST00000520383 144 ntBASIC20.08■□□□□ 0.81
LINC00346Q8IVM7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.08■□□□□ 0.81
LINC00346Q8IVM7 MIR4508-201ENST00000584178 70 ntBASIC20.08■□□□□ 0.81
LINC00346Q8IVM7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
LINC00346Q8IVM7 ANOS2P-203ENST00000472227 1816 ntBASIC20.08■□□□□ 0.8
LINC00346Q8IVM7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.08■□□□□ 0.8
LINC00346Q8IVM7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LINC00346Q8IVM7 ALDH1A3-203ENST00000557963 1670 ntBASIC20.07■□□□□ 0.8
LINC00346Q8IVM7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.07■□□□□ 0.8
LINC00346Q8IVM7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC00346Q8IVM7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LINC00346Q8IVM7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LINC00346Q8IVM7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LINC00346Q8IVM7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.07■□□□□ 0.8
LINC00346Q8IVM7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC00346Q8IVM7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC00346Q8IVM7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC00346Q8IVM7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
LINC00346Q8IVM7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC00346Q8IVM7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC00346Q8IVM7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC00346Q8IVM7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC00346Q8IVM7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LINC00346Q8IVM7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.06■□□□□ 0.8
LINC00346Q8IVM7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC00346Q8IVM7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.06■□□□□ 0.8
LINC00346Q8IVM7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00346Q8IVM7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LINC00346Q8IVM7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LINC00346Q8IVM7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LINC00346Q8IVM7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00346Q8IVM7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00346Q8IVM7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00346Q8IVM7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00346Q8IVM7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00346Q8IVM7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00346Q8IVM7 YBX1P4-201ENST00000392794 808 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms