Protein–RNA interactions for Protein: Q8IUG1

KRTAP1-3, Keratin-associated protein 1-3, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP1-3Q8IUG1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRTAP1-3Q8IUG1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRTAP1-3Q8IUG1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.1■□□□□ 0.65
KRTAP1-3Q8IUG1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
KRTAP1-3Q8IUG1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.1■□□□□ 0.65
KRTAP1-3Q8IUG1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRTAP1-3Q8IUG1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRTAP1-3Q8IUG1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KRTAP1-3Q8IUG1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.1■□□□□ 0.65
KRTAP1-3Q8IUG1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KRTAP1-3Q8IUG1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 MIR6084-201ENST00000622012 110 ntBASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 AL358852.1-201ENST00000623174 1268 ntBASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.09■□□□□ 0.65
KRTAP1-3Q8IUG1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.08■□□□□ 0.65
KRTAP1-3Q8IUG1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
KRTAP1-3Q8IUG1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRTAP1-3Q8IUG1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
KRTAP1-3Q8IUG1 CCDC92B-201ENST00000575506 885 ntBASIC19.08■□□□□ 0.64
KRTAP1-3Q8IUG1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.08■□□□□ 0.64
KRTAP1-3Q8IUG1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.08■□□□□ 0.64
KRTAP1-3Q8IUG1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KRTAP1-3Q8IUG1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRTAP1-3Q8IUG1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRTAP1-3Q8IUG1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRTAP1-3Q8IUG1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRTAP1-3Q8IUG1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.07■□□□□ 0.64
KRTAP1-3Q8IUG1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
KRTAP1-3Q8IUG1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.07■□□□□ 0.64
KRTAP1-3Q8IUG1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.07■□□□□ 0.64
KRTAP1-3Q8IUG1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.07■□□□□ 0.64
KRTAP1-3Q8IUG1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
KRTAP1-3Q8IUG1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.07■□□□□ 0.64
KRTAP1-3Q8IUG1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRTAP1-3Q8IUG1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.06■□□□□ 0.64
KRTAP1-3Q8IUG1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.06■□□□□ 0.64
KRTAP1-3Q8IUG1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
KRTAP1-3Q8IUG1 HLA-L-209ENST00000420110 1011 ntBASIC19.06■□□□□ 0.64
KRTAP1-3Q8IUG1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.06■□□□□ 0.64
KRTAP1-3Q8IUG1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
KRTAP1-3Q8IUG1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
KRTAP1-3Q8IUG1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRTAP1-3Q8IUG1 AC010501.1-201ENST00000606270 1962 ntBASIC19.06■□□□□ 0.64
KRTAP1-3Q8IUG1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRTAP1-3Q8IUG1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
KRTAP1-3Q8IUG1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRTAP1-3Q8IUG1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 AC012414.1-201ENST00000556676 535 ntBASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 pRNA.6-201ENST00000610482 90 ntBASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 pRNA.5-201ENST00000612139 90 ntBASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 pRNA.11-201ENST00000618423 90 ntBASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 pRNA.13-201ENST00000619112 90 ntBASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRTAP1-3Q8IUG1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRTAP1-3Q8IUG1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
KRTAP1-3Q8IUG1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRTAP1-3Q8IUG1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.04■□□□□ 0.64
KRTAP1-3Q8IUG1 MIR572-201ENST00000384983 95 ntBASIC19.04■□□□□ 0.64
KRTAP1-3Q8IUG1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.04■□□□□ 0.64
KRTAP1-3Q8IUG1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.04■□□□□ 0.64
KRTAP1-3Q8IUG1 NTF6G-201ENST00000591094 616 ntBASIC19.04■□□□□ 0.64
KRTAP1-3Q8IUG1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.04■□□□□ 0.64
KRTAP1-3Q8IUG1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRTAP1-3Q8IUG1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRTAP1-3Q8IUG1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
KRTAP1-3Q8IUG1 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.03■□□□□ 0.64
KRTAP1-3Q8IUG1 IGHV3-19-201ENST00000521488 291 ntBASIC19.03■□□□□ 0.64
KRTAP1-3Q8IUG1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.03■□□□□ 0.64
KRTAP1-3Q8IUG1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.03■□□□□ 0.64
KRTAP1-3Q8IUG1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
KRTAP1-3Q8IUG1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRTAP1-3Q8IUG1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.03■□□□□ 0.64
KRTAP1-3Q8IUG1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.02■□□□□ 0.64
KRTAP1-3Q8IUG1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.02■□□□□ 0.64
KRTAP1-3Q8IUG1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRTAP1-3Q8IUG1 TERF1P2-201ENST00000583350 1212 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms