Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSMD2Q7Z408 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSMD2Q7Z408 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CSMD2Q7Z408 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSMD2Q7Z408 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.52■□□□□ 0.72
CSMD2Q7Z408 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.52■□□□□ 0.72
CSMD2Q7Z408 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
CSMD2Q7Z408 AC092171.4-201ENST00000609130 632 ntBASIC19.52■□□□□ 0.72
CSMD2Q7Z408 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSMD2Q7Z408 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSMD2Q7Z408 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSMD2Q7Z408 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.52■□□□□ 0.72
CSMD2Q7Z408 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CSMD2Q7Z408 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CSMD2Q7Z408 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 ERN1-208ENST00000606895 2068 ntBASIC19.51■□□□□ 0.71
CSMD2Q7Z408 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.51■□□□□ 0.71
CSMD2Q7Z408 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.5■□□□□ 0.71
CSMD2Q7Z408 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.5■□□□□ 0.71
CSMD2Q7Z408 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.5■□□□□ 0.71
CSMD2Q7Z408 AL355802.2-201ENST00000402069 882 ntBASIC19.5■□□□□ 0.71
CSMD2Q7Z408 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
CSMD2Q7Z408 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSMD2Q7Z408 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.5■□□□□ 0.71
CSMD2Q7Z408 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.5■□□□□ 0.71
CSMD2Q7Z408 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSMD2Q7Z408 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSMD2Q7Z408 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSMD2Q7Z408 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CSMD2Q7Z408 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSMD2Q7Z408 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSMD2Q7Z408 BX842568.3-201ENST00000418104 571 ntBASIC19.49■□□□□ 0.71
CSMD2Q7Z408 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CSMD2Q7Z408 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSMD2Q7Z408 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSMD2Q7Z408 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CSMD2Q7Z408 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.48■□□□□ 0.71
CSMD2Q7Z408 MIR3181-201ENST00000578512 73 ntBASIC19.48■□□□□ 0.71
CSMD2Q7Z408 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSMD2Q7Z408 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSMD2Q7Z408 AL499627.2-201ENST00000606283 725 ntBASIC19.48■□□□□ 0.71
CSMD2Q7Z408 AC073111.5-205ENST00000641717 521 ntBASIC19.48■□□□□ 0.71
CSMD2Q7Z408 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.48■□□□□ 0.71
CSMD2Q7Z408 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSMD2Q7Z408 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.48■□□□□ 0.71
CSMD2Q7Z408 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSMD2Q7Z408 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSMD2Q7Z408 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.47■□□□□ 0.71
CSMD2Q7Z408 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSMD2Q7Z408 TSPY20P-201ENST00000450910 630 ntBASIC19.47■□□□□ 0.71
CSMD2Q7Z408 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.47■□□□□ 0.71
CSMD2Q7Z408 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.47■□□□□ 0.71
CSMD2Q7Z408 AC245100.8-202ENST00000629247 1058 ntBASIC19.47■□□□□ 0.71
CSMD2Q7Z408 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSMD2Q7Z408 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.47■□□□□ 0.71
CSMD2Q7Z408 NTF6G-201ENST00000591094 616 ntBASIC19.46■□□□□ 0.71
CSMD2Q7Z408 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSMD2Q7Z408 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSMD2Q7Z408 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSMD2Q7Z408 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CSMD2Q7Z408 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.46■□□□□ 0.71
CSMD2Q7Z408 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.46■□□□□ 0.71
CSMD2Q7Z408 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CSMD2Q7Z408 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.46■□□□□ 0.71
CSMD2Q7Z408 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.46■□□□□ 0.71
CSMD2Q7Z408 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.7
CSMD2Q7Z408 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.7
CSMD2Q7Z408 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CSMD2Q7Z408 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSMD2Q7Z408 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.45■□□□□ 0.7
CSMD2Q7Z408 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.45■□□□□ 0.7
CSMD2Q7Z408 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSMD2Q7Z408 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSMD2Q7Z408 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSMD2Q7Z408 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CSMD2Q7Z408 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CSMD2Q7Z408 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.45■□□□□ 0.7
CSMD2Q7Z408 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.45■□□□□ 0.7
CSMD2Q7Z408 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSMD2Q7Z408 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.44■□□□□ 0.7
CSMD2Q7Z408 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSMD2Q7Z408 AC131274.2-201ENST00000580697 1507 ntBASIC19.44■□□□□ 0.7
CSMD2Q7Z408 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSMD2Q7Z408 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSMD2Q7Z408 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSMD2Q7Z408 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.44■□□□□ 0.7
CSMD2Q7Z408 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CSMD2Q7Z408 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms