Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF44Q7L0R7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF44Q7L0R7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF44Q7L0R7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.85■■□□□ 1.09
RNF44Q7L0R7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF44Q7L0R7 ALDH1A3-203ENST00000557963 1670 ntBASIC21.85■■□□□ 1.09
RNF44Q7L0R7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF44Q7L0R7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF44Q7L0R7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF44Q7L0R7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF44Q7L0R7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF44Q7L0R7 AL356740.2-201ENST00000601559 647 ntBASIC21.84■■□□□ 1.09
RNF44Q7L0R7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF44Q7L0R7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF44Q7L0R7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF44Q7L0R7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF44Q7L0R7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF44Q7L0R7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF44Q7L0R7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF44Q7L0R7 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF44Q7L0R7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
RNF44Q7L0R7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF44Q7L0R7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF44Q7L0R7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF44Q7L0R7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF44Q7L0R7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
RNF44Q7L0R7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF44Q7L0R7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF44Q7L0R7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF44Q7L0R7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.82■■□□□ 1.08
RNF44Q7L0R7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.82■■□□□ 1.08
RNF44Q7L0R7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RNF44Q7L0R7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF44Q7L0R7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF44Q7L0R7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF44Q7L0R7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF44Q7L0R7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF44Q7L0R7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RNF44Q7L0R7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF44Q7L0R7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF44Q7L0R7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF44Q7L0R7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF44Q7L0R7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
RNF44Q7L0R7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF44Q7L0R7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF44Q7L0R7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF44Q7L0R7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF44Q7L0R7 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.8■■□□□ 1.08
RNF44Q7L0R7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF44Q7L0R7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RNF44Q7L0R7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF44Q7L0R7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.79■■□□□ 1.08
RNF44Q7L0R7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.79■■□□□ 1.08
RNF44Q7L0R7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF44Q7L0R7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF44Q7L0R7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RNF44Q7L0R7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF44Q7L0R7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF44Q7L0R7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RNF44Q7L0R7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF44Q7L0R7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RNF44Q7L0R7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF44Q7L0R7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF44Q7L0R7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RNF44Q7L0R7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RNF44Q7L0R7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RNF44Q7L0R7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF44Q7L0R7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
RNF44Q7L0R7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF44Q7L0R7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF44Q7L0R7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.77■■□□□ 1.08
RNF44Q7L0R7 AC131281.2-201ENST00000520478 145 ntBASIC21.77■■□□□ 1.08
RNF44Q7L0R7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF44Q7L0R7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF44Q7L0R7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF44Q7L0R7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF44Q7L0R7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RNF44Q7L0R7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF44Q7L0R7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
RNF44Q7L0R7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF44Q7L0R7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF44Q7L0R7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RNF44Q7L0R7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF44Q7L0R7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF44Q7L0R7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RNF44Q7L0R7 AL512631.2-201ENST00000604634 923 ntBASIC21.76■■□□□ 1.07
RNF44Q7L0R7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF44Q7L0R7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF44Q7L0R7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms