Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COLCA1Q6ZS62 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.68■□□□□ 0.74
COLCA1Q6ZS62 MIR6722-201ENST00000617286 78 ntBASIC19.68■□□□□ 0.74
COLCA1Q6ZS62 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.68■□□□□ 0.74
COLCA1Q6ZS62 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.68■□□□□ 0.74
COLCA1Q6ZS62 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
COLCA1Q6ZS62 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COLCA1Q6ZS62 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA1Q6ZS62 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 KRT125P-201ENST00000546827 989 ntBASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 AC092028.1-203ENST00000608262 953 ntBASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COLCA1Q6ZS62 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COLCA1Q6ZS62 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COLCA1Q6ZS62 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COLCA1Q6ZS62 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COLCA1Q6ZS62 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COLCA1Q6ZS62 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COLCA1Q6ZS62 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.65■□□□□ 0.74
COLCA1Q6ZS62 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.65■□□□□ 0.74
COLCA1Q6ZS62 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
COLCA1Q6ZS62 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COLCA1Q6ZS62 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COLCA1Q6ZS62 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
COLCA1Q6ZS62 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COLCA1Q6ZS62 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.64■□□□□ 0.73
COLCA1Q6ZS62 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.64■□□□□ 0.73
COLCA1Q6ZS62 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COLCA1Q6ZS62 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COLCA1Q6ZS62 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COLCA1Q6ZS62 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COLCA1Q6ZS62 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
COLCA1Q6ZS62 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COLCA1Q6ZS62 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COLCA1Q6ZS62 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COLCA1Q6ZS62 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.63■□□□□ 0.73
COLCA1Q6ZS62 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.63■□□□□ 0.73
COLCA1Q6ZS62 AC239859.2-201ENST00000444165 318 ntBASIC19.63■□□□□ 0.73
COLCA1Q6ZS62 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.63■□□□□ 0.73
COLCA1Q6ZS62 MIR4787-201ENST00000607364 84 ntBASIC19.63■□□□□ 0.73
COLCA1Q6ZS62 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.63■□□□□ 0.73
COLCA1Q6ZS62 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COLCA1Q6ZS62 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COLCA1Q6ZS62 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COLCA1Q6ZS62 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COLCA1Q6ZS62 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COLCA1Q6ZS62 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COLCA1Q6ZS62 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COLCA1Q6ZS62 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.62■□□□□ 0.73
COLCA1Q6ZS62 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COLCA1Q6ZS62 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.61■□□□□ 0.73
COLCA1Q6ZS62 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COLCA1Q6ZS62 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COLCA1Q6ZS62 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COLCA1Q6ZS62 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.61■□□□□ 0.73
COLCA1Q6ZS62 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COLCA1Q6ZS62 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COLCA1Q6ZS62 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
COLCA1Q6ZS62 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COLCA1Q6ZS62 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.61■□□□□ 0.73
COLCA1Q6ZS62 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 ANOS2P-203ENST00000472227 1816 ntBASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 AC092068.2-201ENST00000590491 1708 ntBASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COLCA1Q6ZS62 DUSP8P5-201ENST00000422884 1815 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms