Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC144NLQ6NUI1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC144NLQ6NUI1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC144NLQ6NUI1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC144NLQ6NUI1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC144NLQ6NUI1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CCDC144NLQ6NUI1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC144NLQ6NUI1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC144NLQ6NUI1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC144NLQ6NUI1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 MIR6724-1-201ENST00000616420 92 ntBASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 MIR6724-2-201ENST00000616483 92 ntBASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 MIR6724-4-201ENST00000617390 92 ntBASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 MIR6724-3-201ENST00000622482 92 ntBASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC144NLQ6NUI1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC144NLQ6NUI1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCDC144NLQ6NUI1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC144NLQ6NUI1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC144NLQ6NUI1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC144NLQ6NUI1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC144NLQ6NUI1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC144NLQ6NUI1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC144NLQ6NUI1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC144NLQ6NUI1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC144NLQ6NUI1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC144NLQ6NUI1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC144NLQ6NUI1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC144NLQ6NUI1 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC144NLQ6NUI1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC144NLQ6NUI1 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.41■□□□□ 0.54
CCDC144NLQ6NUI1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC144NLQ6NUI1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC144NLQ6NUI1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC144NLQ6NUI1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC144NLQ6NUI1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC144NLQ6NUI1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC144NLQ6NUI1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC144NLQ6NUI1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC144NLQ6NUI1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC144NLQ6NUI1 AL356441.2-201ENST00000443009 864 ntBASIC18.4■□□□□ 0.54
CCDC144NLQ6NUI1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC144NLQ6NUI1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC144NLQ6NUI1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC144NLQ6NUI1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC144NLQ6NUI1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
CCDC144NLQ6NUI1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC144NLQ6NUI1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC144NLQ6NUI1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC144NLQ6NUI1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC144NLQ6NUI1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC144NLQ6NUI1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC144NLQ6NUI1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC144NLQ6NUI1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC144NLQ6NUI1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC144NLQ6NUI1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC144NLQ6NUI1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC144NLQ6NUI1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC144NLQ6NUI1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC144NLQ6NUI1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC144NLQ6NUI1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC144NLQ6NUI1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC144NLQ6NUI1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC144NLQ6NUI1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC144NLQ6NUI1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC144NLQ6NUI1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC144NLQ6NUI1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC144NLQ6NUI1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC144NLQ6NUI1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC144NLQ6NUI1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC144NLQ6NUI1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC144NLQ6NUI1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC144NLQ6NUI1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms