Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.51■□□□□ 0.87
RTL6Q6ICC9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.51■□□□□ 0.87
RTL6Q6ICC9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL6Q6ICC9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RTL6Q6ICC9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.5■□□□□ 0.87
RTL6Q6ICC9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.5■□□□□ 0.87
RTL6Q6ICC9 AL136162.1-201ENST00000607711 1078 ntBASIC20.5■□□□□ 0.87
RTL6Q6ICC9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTL6Q6ICC9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.5■□□□□ 0.87
RTL6Q6ICC9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL6Q6ICC9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTL6Q6ICC9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL6Q6ICC9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RTL6Q6ICC9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTL6Q6ICC9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.49■□□□□ 0.87
RTL6Q6ICC9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL6Q6ICC9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL6Q6ICC9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.48■□□□□ 0.87
RTL6Q6ICC9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTL6Q6ICC9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL6Q6ICC9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RTL6Q6ICC9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.48■□□□□ 0.87
RTL6Q6ICC9 AL031432.3-201ENST00000607698 485 ntBASIC20.48■□□□□ 0.87
RTL6Q6ICC9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.48■□□□□ 0.87
RTL6Q6ICC9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL6Q6ICC9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL6Q6ICC9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL6Q6ICC9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTL6Q6ICC9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL6Q6ICC9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL6Q6ICC9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RTL6Q6ICC9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL6Q6ICC9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL6Q6ICC9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL6Q6ICC9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RTL6Q6ICC9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTL6Q6ICC9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTL6Q6ICC9 AC135279.3-201ENST00000610945 1311 ntBASIC20.47■□□□□ 0.87
RTL6Q6ICC9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL6Q6ICC9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RTL6Q6ICC9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.46■□□□□ 0.87
RTL6Q6ICC9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RTL6Q6ICC9 AC024257.2-201ENST00000549699 147 ntBASIC20.46■□□□□ 0.87
RTL6Q6ICC9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.46■□□□□ 0.87
RTL6Q6ICC9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL6Q6ICC9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RTL6Q6ICC9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.45■□□□□ 0.86
RTL6Q6ICC9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTL6Q6ICC9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL6Q6ICC9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL6Q6ICC9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL6Q6ICC9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL6Q6ICC9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.45■□□□□ 0.86
RTL6Q6ICC9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.45■□□□□ 0.86
RTL6Q6ICC9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL6Q6ICC9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.45■□□□□ 0.86
RTL6Q6ICC9 SUDS3P1-201ENST00000505831 966 ntBASIC20.45■□□□□ 0.86
RTL6Q6ICC9 AL022069.1-201ENST00000568025 1636 ntBASIC20.45■□□□□ 0.86
RTL6Q6ICC9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 AC022211.4-201ENST00000625094 2161 ntBASIC20.44■□□□□ 0.86
RTL6Q6ICC9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 AC142381.2-201ENST00000566120 298 ntBASIC20.44■□□□□ 0.86
RTL6Q6ICC9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.44■□□□□ 0.86
RTL6Q6ICC9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL6Q6ICC9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RTL6Q6ICC9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL6Q6ICC9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.43■□□□□ 0.86
RTL6Q6ICC9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.43■□□□□ 0.86
RTL6Q6ICC9 ZNRF2P3-201ENST00000424200 374 ntBASIC20.43■□□□□ 0.86
RTL6Q6ICC9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.43■□□□□ 0.86
RTL6Q6ICC9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.43■□□□□ 0.86
RTL6Q6ICC9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL6Q6ICC9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL6Q6ICC9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTL6Q6ICC9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL6Q6ICC9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTL6Q6ICC9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.42■□□□□ 0.86
RTL6Q6ICC9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL6Q6ICC9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL6Q6ICC9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.42■□□□□ 0.86
RTL6Q6ICC9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTL6Q6ICC9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms