Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCSMST1Q4G0I0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.21■■□□□ 1.15
CCSMST1Q4G0I0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCSMST1Q4G0I0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCSMST1Q4G0I0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCSMST1Q4G0I0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CCSMST1Q4G0I0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCSMST1Q4G0I0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCSMST1Q4G0I0 MTDHP2-201ENST00000601468 714 ntBASIC22.2■■□□□ 1.14
CCSMST1Q4G0I0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.2■■□□□ 1.14
CCSMST1Q4G0I0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CCSMST1Q4G0I0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CCSMST1Q4G0I0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCSMST1Q4G0I0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCSMST1Q4G0I0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCSMST1Q4G0I0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCSMST1Q4G0I0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.19■■□□□ 1.14
CCSMST1Q4G0I0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCSMST1Q4G0I0 AC010997.5-201ENST00000609182 354 ntBASIC22.19■■□□□ 1.14
CCSMST1Q4G0I0 MIR6722-201ENST00000617286 78 ntBASIC22.19■■□□□ 1.14
CCSMST1Q4G0I0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCSMST1Q4G0I0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.19■■□□□ 1.14
CCSMST1Q4G0I0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCSMST1Q4G0I0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCSMST1Q4G0I0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CCSMST1Q4G0I0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.19■■□□□ 1.14
CCSMST1Q4G0I0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CCSMST1Q4G0I0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.18■■□□□ 1.14
CCSMST1Q4G0I0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCSMST1Q4G0I0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCSMST1Q4G0I0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCSMST1Q4G0I0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.18■■□□□ 1.14
CCSMST1Q4G0I0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCSMST1Q4G0I0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.18■■□□□ 1.14
CCSMST1Q4G0I0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCSMST1Q4G0I0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.16■■□□□ 1.14
CCSMST1Q4G0I0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCSMST1Q4G0I0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCSMST1Q4G0I0 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.16■■□□□ 1.14
CCSMST1Q4G0I0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.16■■□□□ 1.14
CCSMST1Q4G0I0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CCSMST1Q4G0I0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CCSMST1Q4G0I0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCSMST1Q4G0I0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCSMST1Q4G0I0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CCSMST1Q4G0I0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCSMST1Q4G0I0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCSMST1Q4G0I0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CCSMST1Q4G0I0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCSMST1Q4G0I0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.15■■□□□ 1.14
CCSMST1Q4G0I0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CCSMST1Q4G0I0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCSMST1Q4G0I0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCSMST1Q4G0I0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCSMST1Q4G0I0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.14■■□□□ 1.14
CCSMST1Q4G0I0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.14■■□□□ 1.13
CCSMST1Q4G0I0 KRT16P3-201ENST00000439127 1283 ntBASIC22.14■■□□□ 1.13
CCSMST1Q4G0I0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CCSMST1Q4G0I0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.14■■□□□ 1.13
CCSMST1Q4G0I0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCSMST1Q4G0I0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.14■■□□□ 1.13
CCSMST1Q4G0I0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCSMST1Q4G0I0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
CCSMST1Q4G0I0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCSMST1Q4G0I0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCSMST1Q4G0I0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCSMST1Q4G0I0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCSMST1Q4G0I0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CCSMST1Q4G0I0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms