Protein–RNA interactions for Protein: Q2WGJ8

TMEM249, Transmembrane protein 249, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249Q2WGJ8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM249Q2WGJ8 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM249Q2WGJ8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM249Q2WGJ8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM249Q2WGJ8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM249Q2WGJ8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
TMEM249Q2WGJ8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.17■□□□□ 0.66
TMEM249Q2WGJ8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM249Q2WGJ8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM249Q2WGJ8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.17■□□□□ 0.66
TMEM249Q2WGJ8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM249Q2WGJ8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM249Q2WGJ8 AC096887.2-201ENST00000623443 1957 ntBASIC19.17■□□□□ 0.66
TMEM249Q2WGJ8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM249Q2WGJ8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM249Q2WGJ8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TMEM249Q2WGJ8 SYT6-210ENST00000641643 1587 ntBASIC19.16■□□□□ 0.66
TMEM249Q2WGJ8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
TMEM249Q2WGJ8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM249Q2WGJ8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEM249Q2WGJ8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM249Q2WGJ8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM249Q2WGJ8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.16■□□□□ 0.66
TMEM249Q2WGJ8 AP001330.3-201ENST00000520123 633 ntBASIC19.16■□□□□ 0.66
TMEM249Q2WGJ8 AC092171.4-201ENST00000609130 632 ntBASIC19.16■□□□□ 0.66
TMEM249Q2WGJ8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM249Q2WGJ8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM249Q2WGJ8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM249Q2WGJ8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM249Q2WGJ8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TMEM249Q2WGJ8 AC091305.1-201ENST00000479476 895 ntBASIC19.15■□□□□ 0.66
TMEM249Q2WGJ8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TMEM249Q2WGJ8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM249Q2WGJ8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM249Q2WGJ8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM249Q2WGJ8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM249Q2WGJ8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM249Q2WGJ8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM249Q2WGJ8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM249Q2WGJ8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM249Q2WGJ8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.14■□□□□ 0.65
TMEM249Q2WGJ8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM249Q2WGJ8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM249Q2WGJ8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM249Q2WGJ8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 AC010501.1-201ENST00000606270 1962 ntBASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM249Q2WGJ8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 AL139125.2-201ENST00000623134 1869 ntBASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM249Q2WGJ8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM249Q2WGJ8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.11■□□□□ 0.65
TMEM249Q2WGJ8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.11■□□□□ 0.65
TMEM249Q2WGJ8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.11■□□□□ 0.65
TMEM249Q2WGJ8 MIR4767-201ENST00000582827 78 ntBASIC19.11■□□□□ 0.65
TMEM249Q2WGJ8 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.11■□□□□ 0.65
TMEM249Q2WGJ8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM249Q2WGJ8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.11■□□□□ 0.65
TMEM249Q2WGJ8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.11■□□□□ 0.65
TMEM249Q2WGJ8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 AC012676.1-201ENST00000574705 1949 ntBASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 MIR6821-201ENST00000617625 74 ntBASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TMEM249Q2WGJ8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms