Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GABREP78334 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GABREP78334 BX842568.3-201ENST00000418104 571 ntBASIC21.75■■□□□ 1.07
GABREP78334 AC006455.2-201ENST00000429931 906 ntBASIC21.75■■□□□ 1.07
GABREP78334 AC034268.1-201ENST00000441047 882 ntBASIC21.75■■□□□ 1.07
GABREP78334 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.75■■□□□ 1.07
GABREP78334 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GABREP78334 RARRES2P11-201ENST00000635158 484 ntBASIC21.75■■□□□ 1.07
GABREP78334 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GABREP78334 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
GABREP78334 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.74■■□□□ 1.07
GABREP78334 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.74■■□□□ 1.07
GABREP78334 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.74■■□□□ 1.07
GABREP78334 AC009086.3-201ENST00000623486 1008 ntBASIC21.74■■□□□ 1.07
GABREP78334 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GABREP78334 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GABREP78334 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.73■■□□□ 1.07
GABREP78334 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.73■■□□□ 1.07
GABREP78334 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.73■■□□□ 1.07
GABREP78334 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GABREP78334 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.73■■□□□ 1.07
GABREP78334 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.73■■□□□ 1.07
GABREP78334 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GABREP78334 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.73■■□□□ 1.07
GABREP78334 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
GABREP78334 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GABREP78334 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GABREP78334 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.72■■□□□ 1.07
GABREP78334 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GABREP78334 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
GABREP78334 IKBKGP1-201ENST00000612193 1073 ntBASIC21.72■■□□□ 1.07
GABREP78334 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.72■■□□□ 1.07
GABREP78334 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
GABREP78334 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GABREP78334 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
GABREP78334 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.72■■□□□ 1.07
GABREP78334 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.72■■□□□ 1.07
GABREP78334 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GABREP78334 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
GABREP78334 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
GABREP78334 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.71■■□□□ 1.07
GABREP78334 AL022069.1-201ENST00000568025 1636 ntBASIC21.71■■□□□ 1.07
GABREP78334 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
GABREP78334 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.71■■□□□ 1.07
GABREP78334 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.71■■□□□ 1.07
GABREP78334 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.71■■□□□ 1.07
GABREP78334 AL137784.2-201ENST00000607332 1000 ntBASIC21.71■■□□□ 1.07
GABREP78334 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GABREP78334 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
GABREP78334 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GABREP78334 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GABREP78334 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
GABREP78334 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.7■■□□□ 1.06
GABREP78334 MIR3181-201ENST00000578512 73 ntBASIC21.7■■□□□ 1.06
GABREP78334 AC022517.1-201ENST00000592429 346 ntBASIC21.7■■□□□ 1.06
GABREP78334 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
GABREP78334 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.7■■□□□ 1.06
GABREP78334 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GABREP78334 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GABREP78334 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.69■■□□□ 1.06
GABREP78334 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.69■■□□□ 1.06
GABREP78334 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.69■■□□□ 1.06
GABREP78334 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GABREP78334 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.69■■□□□ 1.06
GABREP78334 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.69■■□□□ 1.06
GABREP78334 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GABREP78334 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GABREP78334 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GABREP78334 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
GABREP78334 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.68■■□□□ 1.06
GABREP78334 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GABREP78334 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.68■■□□□ 1.06
GABREP78334 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GABREP78334 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GABREP78334 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GABREP78334 AC126544.1-201ENST00000580842 1059 ntBASIC21.68■■□□□ 1.06
GABREP78334 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GABREP78334 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.67■■□□□ 1.06
GABREP78334 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GABREP78334 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
GABREP78334 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.67■■□□□ 1.06
GABREP78334 YBX1P1-201ENST00000445822 960 ntBASIC21.67■■□□□ 1.06
GABREP78334 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.67■■□□□ 1.06
GABREP78334 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GABREP78334 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GABREP78334 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.66■■□□□ 1.06
GABREP78334 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GABREP78334 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GABREP78334 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GABREP78334 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
GABREP78334 KRT18P5-201ENST00000436075 1291 ntBASIC21.66■■□□□ 1.06
GABREP78334 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GABREP78334 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GABREP78334 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.66■■□□□ 1.06
GABREP78334 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GABREP78334 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GABREP78334 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GABREP78334 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
GABREP78334 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GABREP78334 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms