Protein–RNA interactions for Protein: P63027

VAMP2, Vesicle-associated membrane protein 2, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2P63027 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAMP2P63027 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAMP2P63027 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAMP2P63027 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAMP2P63027 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAMP2P63027 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAMP2P63027 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAMP2P63027 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAMP2P63027 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VAMP2P63027 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VAMP2P63027 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VAMP2P63027 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
VAMP2P63027 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.64■□□□□ 0.58
VAMP2P63027 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
VAMP2P63027 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
VAMP2P63027 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAMP2P63027 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VAMP2P63027 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAMP2P63027 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VAMP2P63027 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.64■□□□□ 0.57
VAMP2P63027 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VAMP2P63027 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.64■□□□□ 0.57
VAMP2P63027 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.64■□□□□ 0.57
VAMP2P63027 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.64■□□□□ 0.57
VAMP2P63027 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.64■□□□□ 0.57
VAMP2P63027 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VAMP2P63027 ANOS2P-203ENST00000472227 1816 ntBASIC18.64■□□□□ 0.57
VAMP2P63027 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAMP2P63027 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAMP2P63027 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
VAMP2P63027 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAMP2P63027 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VAMP2P63027 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VAMP2P63027 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VAMP2P63027 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAMP2P63027 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAMP2P63027 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.63■□□□□ 0.57
VAMP2P63027 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAMP2P63027 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAMP2P63027 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.63■□□□□ 0.57
VAMP2P63027 MIR3960-201ENST00000583311 91 ntBASIC18.63■□□□□ 0.57
VAMP2P63027 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VAMP2P63027 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAMP2P63027 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAMP2P63027 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VAMP2P63027 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VAMP2P63027 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VAMP2P63027 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VAMP2P63027 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
VAMP2P63027 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAMP2P63027 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAMP2P63027 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAMP2P63027 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAMP2P63027 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VAMP2P63027 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VAMP2P63027 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VAMP2P63027 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VAMP2P63027 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VAMP2P63027 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VAMP2P63027 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.6■□□□□ 0.57
VAMP2P63027 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
VAMP2P63027 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VAMP2P63027 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VAMP2P63027 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAMP2P63027 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VAMP2P63027 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAMP2P63027 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VAMP2P63027 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAMP2P63027 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
VAMP2P63027 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VAMP2P63027 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAMP2P63027 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAMP2P63027 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
VAMP2P63027 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAMP2P63027 LINC00526-201ENST00000581067 1875 ntBASIC18.58■□□□□ 0.57
VAMP2P63027 C1orf229-201ENST00000623686 2258 ntBASIC18.58■□□□□ 0.57
VAMP2P63027 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VAMP2P63027 AC127496.7-201ENST00000625110 1798 ntBASIC18.58■□□□□ 0.57
VAMP2P63027 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
VAMP2P63027 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.58■□□□□ 0.57
VAMP2P63027 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VAMP2P63027 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAMP2P63027 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAMP2P63027 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAMP2P63027 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.58■□□□□ 0.56
VAMP2P63027 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAMP2P63027 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.58■□□□□ 0.56
VAMP2P63027 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAMP2P63027 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VAMP2P63027 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAMP2P63027 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VAMP2P63027 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
VAMP2P63027 GUSBP5-202ENST00000510805 1989 ntBASIC18.57■□□□□ 0.56
VAMP2P63027 FOXO3B-201ENST00000395675 1928 ntBASIC18.57■□□□□ 0.56
VAMP2P63027 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAMP2P63027 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAMP2P63027 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
VAMP2P63027 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAMP2P63027 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAMP2P63027 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms