Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN6P56747 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
CLDN6P56747 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN6P56747 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.97■■□□□ 1.11
CLDN6P56747 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN6P56747 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN6P56747 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN6P56747 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN6P56747 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.96■■□□□ 1.11
CLDN6P56747 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.96■■□□□ 1.11
CLDN6P56747 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.96■■□□□ 1.11
CLDN6P56747 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CLDN6P56747 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.96■■□□□ 1.11
CLDN6P56747 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.96■■□□□ 1.11
CLDN6P56747 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.95■■□□□ 1.11
CLDN6P56747 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN6P56747 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.95■■□□□ 1.1
CLDN6P56747 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.95■■□□□ 1.1
CLDN6P56747 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CLDN6P56747 KRT18P5-201ENST00000436075 1291 ntBASIC21.95■■□□□ 1.1
CLDN6P56747 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.95■■□□□ 1.1
CLDN6P56747 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN6P56747 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.95■■□□□ 1.1
CLDN6P56747 MIR3181-201ENST00000578512 73 ntBASIC21.95■■□□□ 1.1
CLDN6P56747 AC233992.3-201ENST00000607491 485 ntBASIC21.95■■□□□ 1.1
CLDN6P56747 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.95■■□□□ 1.1
CLDN6P56747 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN6P56747 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN6P56747 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN6P56747 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN6P56747 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.95■■□□□ 1.1
CLDN6P56747 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.94■■□□□ 1.1
CLDN6P56747 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN6P56747 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
CLDN6P56747 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.94■■□□□ 1.1
CLDN6P56747 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.94■■□□□ 1.1
CLDN6P56747 AC092437.1-201ENST00000624794 1048 ntBASIC21.94■■□□□ 1.1
CLDN6P56747 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.94■■□□□ 1.1
CLDN6P56747 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CLDN6P56747 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN6P56747 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN6P56747 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN6P56747 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN6P56747 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN6P56747 AC034268.1-201ENST00000441047 882 ntBASIC21.93■■□□□ 1.1
CLDN6P56747 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN6P56747 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.93■■□□□ 1.1
CLDN6P56747 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.93■■□□□ 1.1
CLDN6P56747 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN6P56747 AC009086.3-201ENST00000623486 1008 ntBASIC21.93■■□□□ 1.1
CLDN6P56747 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.92■■□□□ 1.1
CLDN6P56747 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN6P56747 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.92■■□□□ 1.1
CLDN6P56747 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN6P56747 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.92■■□□□ 1.1
CLDN6P56747 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.92■■□□□ 1.1
CLDN6P56747 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN6P56747 AL137784.2-201ENST00000607332 1000 ntBASIC21.92■■□□□ 1.1
CLDN6P56747 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CLDN6P56747 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.92■■□□□ 1.1
CLDN6P56747 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN6P56747 SLC6A10P-202ENST00000431994 2058 ntBASIC21.91■■□□□ 1.1
CLDN6P56747 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.91■■□□□ 1.1
CLDN6P56747 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.91■■□□□ 1.1
CLDN6P56747 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.91■■□□□ 1.1
CLDN6P56747 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CLDN6P56747 BX842568.3-201ENST00000418104 571 ntBASIC21.91■■□□□ 1.1
CLDN6P56747 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.91■■□□□ 1.1
CLDN6P56747 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN6P56747 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CLDN6P56747 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CLDN6P56747 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN6P56747 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN6P56747 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CLDN6P56747 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN6P56747 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN6P56747 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.9■■□□□ 1.1
CLDN6P56747 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.9■■□□□ 1.1
CLDN6P56747 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.9■■□□□ 1.1
CLDN6P56747 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.9■■□□□ 1.1
CLDN6P56747 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.9■■□□□ 1.1
CLDN6P56747 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.9■■□□□ 1.1
CLDN6P56747 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN6P56747 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN6P56747 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLDN6P56747 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLDN6P56747 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLDN6P56747 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.89■■□□□ 1.1
CLDN6P56747 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
CLDN6P56747 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.89■■□□□ 1.09
CLDN6P56747 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
CLDN6P56747 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.89■■□□□ 1.09
CLDN6P56747 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CLDN6P56747 DUX4L2-201ENST00000561772 1275 ntBASIC21.89■■□□□ 1.09
CLDN6P56747 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CLDN6P56747 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.89■■□□□ 1.09
CLDN6P56747 DUX4L6-201ENST00000626483 1275 ntBASIC21.89■■□□□ 1.09
CLDN6P56747 DUX4L1-201ENST00000627662 1275 ntBASIC21.89■■□□□ 1.09
CLDN6P56747 DUX4L8-201ENST00000629013 1275 ntBASIC21.89■■□□□ 1.09
CLDN6P56747 DUX4L3-201ENST00000630187 1275 ntBASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms