Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDH11P55287 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CDH11P55287 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH11P55287 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.74■□□□□ 0.91
CDH11P55287 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH11P55287 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.74■□□□□ 0.91
CDH11P55287 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH11P55287 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.74■□□□□ 0.91
CDH11P55287 AC009299.2-201ENST00000482477 511 ntBASIC20.74■□□□□ 0.91
CDH11P55287 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.74■□□□□ 0.91
CDH11P55287 AC019171.1-201ENST00000601251 1056 ntBASIC20.74■□□□□ 0.91
CDH11P55287 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH11P55287 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH11P55287 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH11P55287 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CDH11P55287 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CDH11P55287 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH11P55287 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH11P55287 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH11P55287 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH11P55287 AL031848.2-201ENST00000607670 837 ntBASIC20.73■□□□□ 0.91
CDH11P55287 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH11P55287 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH11P55287 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH11P55287 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH11P55287 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH11P55287 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH11P55287 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH11P55287 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH11P55287 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH11P55287 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDH11P55287 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.72■□□□□ 0.91
CDH11P55287 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH11P55287 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH11P55287 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDH11P55287 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.72■□□□□ 0.91
CDH11P55287 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH11P55287 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH11P55287 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH11P55287 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CDH11P55287 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.71■□□□□ 0.91
CDH11P55287 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH11P55287 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDH11P55287 LONRF2P2-201ENST00000439212 571 ntBASIC20.71■□□□□ 0.91
CDH11P55287 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH11P55287 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH11P55287 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH11P55287 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH11P55287 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDH11P55287 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH11P55287 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH11P55287 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDH11P55287 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH11P55287 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH11P55287 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDH11P55287 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH11P55287 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH11P55287 AC103724.3-201ENST00000564481 992 ntBASIC20.7■□□□□ 0.9
CDH11P55287 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH11P55287 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.7■□□□□ 0.9
CDH11P55287 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH11P55287 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH11P55287 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH11P55287 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH11P55287 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH11P55287 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH11P55287 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH11P55287 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH11P55287 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH11P55287 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH11P55287 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CDH11P55287 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH11P55287 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH11P55287 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CDH11P55287 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH11P55287 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH11P55287 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDH11P55287 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH11P55287 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH11P55287 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH11P55287 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH11P55287 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH11P55287 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH11P55287 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH11P55287 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH11P55287 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.68■□□□□ 0.9
CDH11P55287 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CDH11P55287 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH11P55287 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
CDH11P55287 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDH11P55287 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH11P55287 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH11P55287 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDH11P55287 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDH11P55287 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH11P55287 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CDH11P55287 AL117328.2-201ENST00000624617 1940 ntBASIC20.67■□□□□ 0.9
CDH11P55287 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH11P55287 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CDH11P55287 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms