Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.21■□□□□ 0.99
SMSP52788 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMSP52788 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMSP52788 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMSP52788 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMSP52788 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.21■□□□□ 0.99
SMSP52788 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.21■□□□□ 0.99
SMSP52788 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.21■□□□□ 0.99
SMSP52788 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.21■□□□□ 0.99
SMSP52788 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.21■□□□□ 0.99
SMSP52788 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMSP52788 ABCB10P4-201ENST00000566803 2184 ntBASIC21.21■□□□□ 0.99
SMSP52788 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SMSP52788 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.21■□□□□ 0.99
SMSP52788 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMSP52788 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMSP52788 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMSP52788 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SMSP52788 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SMSP52788 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMSP52788 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMSP52788 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.2■□□□□ 0.98
SMSP52788 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.2■□□□□ 0.98
SMSP52788 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.2■□□□□ 0.98
SMSP52788 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMSP52788 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SMSP52788 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMSP52788 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMSP52788 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
SMSP52788 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.19■□□□□ 0.98
SMSP52788 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.19■□□□□ 0.98
SMSP52788 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMSP52788 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMSP52788 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SMSP52788 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SMSP52788 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMSP52788 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.19■□□□□ 0.98
SMSP52788 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.19■□□□□ 0.98
SMSP52788 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.19■□□□□ 0.98
SMSP52788 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.19■□□□□ 0.98
SMSP52788 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMSP52788 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SMSP52788 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMSP52788 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.19■□□□□ 0.98
SMSP52788 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SMSP52788 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.18■□□□□ 0.98
SMSP52788 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMSP52788 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SMSP52788 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.18■□□□□ 0.98
SMSP52788 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMSP52788 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.18■□□□□ 0.98
SMSP52788 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.18■□□□□ 0.98
SMSP52788 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SMSP52788 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SMSP52788 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMSP52788 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SMSP52788 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SMSP52788 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.17■□□□□ 0.98
SMSP52788 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.17■□□□□ 0.98
SMSP52788 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMSP52788 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SMSP52788 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.17■□□□□ 0.98
SMSP52788 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMSP52788 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SMSP52788 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMSP52788 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMSP52788 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMSP52788 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMSP52788 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMSP52788 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SMSP52788 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SMSP52788 HLA-L-211ENST00000482052 1765 ntBASIC21.16■□□□□ 0.98
SMSP52788 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMSP52788 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SMSP52788 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.16■□□□□ 0.98
SMSP52788 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMSP52788 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.16■□□□□ 0.98
SMSP52788 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.16■□□□□ 0.98
SMSP52788 AC010997.5-201ENST00000609182 354 ntBASIC21.16■□□□□ 0.98
SMSP52788 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SMSP52788 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMSP52788 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMSP52788 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMSP52788 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMSP52788 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMSP52788 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMSP52788 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMSP52788 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMSP52788 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMSP52788 AL136116.3-201ENST00000402907 1138 ntBASIC21.15■□□□□ 0.98
SMSP52788 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMSP52788 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.15■□□□□ 0.98
SMSP52788 AC131281.2-201ENST00000520478 145 ntBASIC21.15■□□□□ 0.98
SMSP52788 MIR4281-201ENST00000580852 62 ntBASIC21.15■□□□□ 0.98
SMSP52788 MTDHP2-201ENST00000601468 714 ntBASIC21.15■□□□□ 0.98
SMSP52788 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMSP52788 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.15■□□□□ 0.98
SMSP52788 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMSP52788 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SMSP52788 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms