Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.75■□□□□ 0.75
GDNFP39905 GUSBP5-202ENST00000510805 1989 ntBASIC19.75■□□□□ 0.75
GDNFP39905 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.75■□□□□ 0.75
GDNFP39905 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDNFP39905 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDNFP39905 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDNFP39905 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GDNFP39905 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.74■□□□□ 0.75
GDNFP39905 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
GDNFP39905 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GDNFP39905 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDNFP39905 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDNFP39905 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.74■□□□□ 0.75
GDNFP39905 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.74■□□□□ 0.75
GDNFP39905 ANOS2P-203ENST00000472227 1816 ntBASIC19.74■□□□□ 0.75
GDNFP39905 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.74■□□□□ 0.75
GDNFP39905 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDNFP39905 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDNFP39905 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GDNFP39905 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.73■□□□□ 0.75
GDNFP39905 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.73■□□□□ 0.75
GDNFP39905 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GDNFP39905 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GDNFP39905 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GDNFP39905 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GDNFP39905 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GDNFP39905 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
GDNFP39905 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.73■□□□□ 0.75
GDNFP39905 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GDNFP39905 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.73■□□□□ 0.75
GDNFP39905 AC133552.2-201ENST00000619106 1032 ntBASIC19.73■□□□□ 0.75
GDNFP39905 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.73■□□□□ 0.75
GDNFP39905 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
GDNFP39905 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GDNFP39905 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GDNFP39905 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GDNFP39905 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GDNFP39905 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GDNFP39905 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GDNFP39905 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
GDNFP39905 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.72■□□□□ 0.75
GDNFP39905 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GDNFP39905 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GDNFP39905 AL024507.2-201ENST00000606070 2574 ntBASIC19.72■□□□□ 0.75
GDNFP39905 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
GDNFP39905 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDNFP39905 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDNFP39905 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDNFP39905 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDNFP39905 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDNFP39905 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDNFP39905 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDNFP39905 DUSP8P3-201ENST00000399571 1760 ntBASIC19.71■□□□□ 0.75
GDNFP39905 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDNFP39905 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
GDNFP39905 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDNFP39905 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GDNFP39905 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDNFP39905 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
GDNFP39905 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.71■□□□□ 0.75
GDNFP39905 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GDNFP39905 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDNFP39905 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GDNFP39905 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GDNFP39905 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GDNFP39905 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GDNFP39905 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.7■□□□□ 0.74
GDNFP39905 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GDNFP39905 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GDNFP39905 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GDNFP39905 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GDNFP39905 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
GDNFP39905 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GDNFP39905 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.7■□□□□ 0.74
GDNFP39905 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GDNFP39905 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDNFP39905 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDNFP39905 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.69■□□□□ 0.74
GDNFP39905 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.69■□□□□ 0.74
GDNFP39905 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GDNFP39905 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDNFP39905 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.69■□□□□ 0.74
GDNFP39905 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDNFP39905 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDNFP39905 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GDNFP39905 ECEL1P1-201ENST00000373592 1742 ntBASIC19.69■□□□□ 0.74
GDNFP39905 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDNFP39905 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.69■□□□□ 0.74
GDNFP39905 AL592293.1-201ENST00000502889 1188 ntBASIC19.69■□□□□ 0.74
GDNFP39905 U85056.1-201ENST00000616429 682 ntBASIC19.69■□□□□ 0.74
GDNFP39905 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GDNFP39905 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.69■□□□□ 0.74
GDNFP39905 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDNFP39905 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDNFP39905 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.69■□□□□ 0.74
GDNFP39905 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GDNFP39905 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GDNFP39905 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GDNFP39905 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GDNFP39905 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms