Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.44■■■□□ 2.14
PDE6BP35913 SLC47A1P1-202ENST00000449666 945 ntBASIC28.44■■■□□ 2.14
PDE6BP35913 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC28.44■■■□□ 2.14
PDE6BP35913 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDE6BP35913 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC28.43■■■□□ 2.14
PDE6BP35913 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDE6BP35913 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDE6BP35913 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
PDE6BP35913 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDE6BP35913 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.43■■■□□ 2.14
PDE6BP35913 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDE6BP35913 NME4-202ENST00000382940 766 ntTSL 3 BASIC28.43■■■□□ 2.14
PDE6BP35913 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
PDE6BP35913 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDE6BP35913 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC28.43■■■□□ 2.14
PDE6BP35913 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.43■■■□□ 2.14
PDE6BP35913 NME4-211ENST00000620944 1193 ntTSL 2 BASIC28.43■■■□□ 2.14
PDE6BP35913 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
PDE6BP35913 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.43■■■□□ 2.14
PDE6BP35913 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDE6BP35913 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.43■■■□□ 2.14
PDE6BP35913 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
PDE6BP35913 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.42■■■□□ 2.14
PDE6BP35913 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
PDE6BP35913 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PDE6BP35913 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC28.42■■■□□ 2.14
PDE6BP35913 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC28.42■■■□□ 2.14
PDE6BP35913 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.42■■■□□ 2.14
PDE6BP35913 MIR6089-201ENST00000616698 64 ntBASIC28.42■■■□□ 2.14
PDE6BP35913 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC28.42■■■□□ 2.14
PDE6BP35913 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.42■■■□□ 2.14
PDE6BP35913 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC28.42■■■□□ 2.14
PDE6BP35913 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC28.41■■■□□ 2.14
PDE6BP35913 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PDE6BP35913 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PDE6BP35913 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.41■■■□□ 2.14
PDE6BP35913 AC092437.1-201ENST00000624794 1048 ntBASIC28.41■■■□□ 2.14
PDE6BP35913 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.41■■■□□ 2.14
PDE6BP35913 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.41■■■□□ 2.14
PDE6BP35913 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.41■■■□□ 2.14
PDE6BP35913 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.41■■■□□ 2.14
PDE6BP35913 TSPY26P-201ENST00000476365 1326 ntBASIC28.41■■■□□ 2.14
PDE6BP35913 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC28.41■■■□□ 2.14
PDE6BP35913 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
PDE6BP35913 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
PDE6BP35913 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PDE6BP35913 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
PDE6BP35913 DUX4L2-201ENST00000561772 1275 ntBASIC28.4■■■□□ 2.14
PDE6BP35913 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.4■■■□□ 2.14
PDE6BP35913 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
PDE6BP35913 DUX4L6-201ENST00000626483 1275 ntBASIC28.4■■■□□ 2.14
PDE6BP35913 DUX4L1-201ENST00000627662 1275 ntBASIC28.4■■■□□ 2.14
PDE6BP35913 DUX4L8-201ENST00000629013 1275 ntBASIC28.4■■■□□ 2.14
PDE6BP35913 DUX4L3-201ENST00000630187 1275 ntBASIC28.4■■■□□ 2.14
PDE6BP35913 DUX4L7-201ENST00000630678 1275 ntBASIC28.4■■■□□ 2.14
PDE6BP35913 DUX4L5-201ENST00000630834 1275 ntBASIC28.4■■■□□ 2.14
PDE6BP35913 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.4■■■□□ 2.14
PDE6BP35913 SLC6A10P-202ENST00000431994 2058 ntBASIC28.39■■■□□ 2.14
PDE6BP35913 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
PDE6BP35913 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PDE6BP35913 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PDE6BP35913 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.39■■■□□ 2.14
PDE6BP35913 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.39■■■□□ 2.14
PDE6BP35913 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC28.39■■■□□ 2.14
PDE6BP35913 pRNA.6-201ENST00000610482 90 ntBASIC28.39■■■□□ 2.14
PDE6BP35913 pRNA.5-201ENST00000612139 90 ntBASIC28.39■■■□□ 2.14
PDE6BP35913 pRNA.11-201ENST00000618423 90 ntBASIC28.39■■■□□ 2.14
PDE6BP35913 pRNA.13-201ENST00000619112 90 ntBASIC28.39■■■□□ 2.14
PDE6BP35913 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PDE6BP35913 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.38■■■□□ 2.13
PDE6BP35913 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
PDE6BP35913 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
PDE6BP35913 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
PDE6BP35913 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.38■■■□□ 2.13
PDE6BP35913 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC28.38■■■□□ 2.13
PDE6BP35913 AL358852.1-201ENST00000623174 1268 ntBASIC28.38■■■□□ 2.13
PDE6BP35913 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PDE6BP35913 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
PDE6BP35913 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.37■■■□□ 2.13
PDE6BP35913 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PDE6BP35913 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
PDE6BP35913 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PDE6BP35913 AC123595.1-201ENST00000440769 1046 ntBASIC28.37■■■□□ 2.13
PDE6BP35913 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
PDE6BP35913 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
PDE6BP35913 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PDE6BP35913 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PDE6BP35913 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDE6BP35913 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.36■■■□□ 2.13
PDE6BP35913 AC092803.2-201ENST00000564287 1899 ntBASIC28.36■■■□□ 2.13
PDE6BP35913 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDE6BP35913 AC027612.3-201ENST00000413684 1047 ntBASIC28.36■■■□□ 2.13
PDE6BP35913 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
PDE6BP35913 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC28.36■■■□□ 2.13
PDE6BP35913 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDE6BP35913 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PDE6BP35913 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC28.35■■■□□ 2.13
PDE6BP35913 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
PDE6BP35913 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
PDE6BP35913 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms