Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHKAP35790 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.03■■□□□ 1.44
CHKAP35790 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.03■■□□□ 1.44
CHKAP35790 MIR6089-201ENST00000616698 64 ntBASIC24.03■■□□□ 1.44
CHKAP35790 ABCB10P4-201ENST00000566803 2184 ntBASIC24.03■■□□□ 1.44
CHKAP35790 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CHKAP35790 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.03■■□□□ 1.44
CHKAP35790 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.02■■□□□ 1.44
CHKAP35790 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.02■■□□□ 1.44
CHKAP35790 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.02■■□□□ 1.44
CHKAP35790 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.02■■□□□ 1.44
CHKAP35790 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
CHKAP35790 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.02■■□□□ 1.44
CHKAP35790 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.02■■□□□ 1.44
CHKAP35790 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHKAP35790 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHKAP35790 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.01■■□□□ 1.43
CHKAP35790 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHKAP35790 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHKAP35790 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHKAP35790 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHKAP35790 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.01■■□□□ 1.43
CHKAP35790 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CHKAP35790 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
CHKAP35790 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.01■■□□□ 1.43
CHKAP35790 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.01■■□□□ 1.43
CHKAP35790 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHKAP35790 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.01■■□□□ 1.43
CHKAP35790 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CHKAP35790 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24■■□□□ 1.43
CHKAP35790 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CHKAP35790 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHKAP35790 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHKAP35790 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHKAP35790 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24■■□□□ 1.43
CHKAP35790 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHKAP35790 MIR6724-1-201ENST00000616420 92 ntBASIC24■■□□□ 1.43
CHKAP35790 MIR6724-2-201ENST00000616483 92 ntBASIC24■■□□□ 1.43
CHKAP35790 MIR6724-4-201ENST00000617390 92 ntBASIC24■■□□□ 1.43
CHKAP35790 MIR6724-3-201ENST00000622482 92 ntBASIC24■■□□□ 1.43
CHKAP35790 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24■■□□□ 1.43
CHKAP35790 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24■■□□□ 1.43
CHKAP35790 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHKAP35790 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.99■■□□□ 1.43
CHKAP35790 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHKAP35790 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHKAP35790 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.99■■□□□ 1.43
CHKAP35790 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.99■■□□□ 1.43
CHKAP35790 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.99■■□□□ 1.43
CHKAP35790 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHKAP35790 AC012676.1-201ENST00000574705 1949 ntBASIC23.99■■□□□ 1.43
CHKAP35790 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.99■■□□□ 1.43
CHKAP35790 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHKAP35790 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHKAP35790 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.98■■□□□ 1.43
CHKAP35790 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.98■■□□□ 1.43
CHKAP35790 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHKAP35790 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CHKAP35790 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHKAP35790 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHKAP35790 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHKAP35790 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHKAP35790 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.97■■□□□ 1.43
CHKAP35790 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHKAP35790 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHKAP35790 SNX5-217ENST00000606557 1087 ntBASIC23.97■■□□□ 1.43
CHKAP35790 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.97■■□□□ 1.43
CHKAP35790 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHKAP35790 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CHKAP35790 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHKAP35790 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CHKAP35790 AC008406.3-201ENST00000620001 1374 ntBASIC23.96■■□□□ 1.43
CHKAP35790 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.96■■□□□ 1.43
CHKAP35790 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CHKAP35790 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHKAP35790 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.96■■□□□ 1.43
CHKAP35790 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CHKAP35790 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CHKAP35790 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHKAP35790 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHKAP35790 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.95■■□□□ 1.42
CHKAP35790 MIR6722-201ENST00000617286 78 ntBASIC23.95■■□□□ 1.42
CHKAP35790 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.95■■□□□ 1.42
CHKAP35790 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.95■■□□□ 1.42
CHKAP35790 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.94■■□□□ 1.42
CHKAP35790 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.94■■□□□ 1.42
CHKAP35790 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CHKAP35790 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CHKAP35790 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.94■■□□□ 1.42
CHKAP35790 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.94■■□□□ 1.42
CHKAP35790 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.94■■□□□ 1.42
CHKAP35790 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
CHKAP35790 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHKAP35790 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHKAP35790 DUSP8P5-201ENST00000422884 1815 ntBASIC23.94■■□□□ 1.42
CHKAP35790 HLA-L-211ENST00000482052 1765 ntBASIC23.93■■□□□ 1.42
CHKAP35790 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHKAP35790 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHKAP35790 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.93■■□□□ 1.42
CHKAP35790 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms