Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDHAP31040 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SDHAP31040 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.4■□□□□ 0.86
SDHAP31040 AC010980.1-201ENST00000587192 1142 ntBASIC20.4■□□□□ 0.86
SDHAP31040 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.4■□□□□ 0.86
SDHAP31040 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SDHAP31040 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SDHAP31040 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SDHAP31040 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SDHAP31040 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SDHAP31040 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SDHAP31040 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SDHAP31040 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.39■□□□□ 0.85
SDHAP31040 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.39■□□□□ 0.85
SDHAP31040 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHAP31040 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHAP31040 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHAP31040 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDHAP31040 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.38■□□□□ 0.85
SDHAP31040 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAP31040 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAP31040 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAP31040 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.38■□□□□ 0.85
SDHAP31040 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.38■□□□□ 0.85
SDHAP31040 MIR4281-201ENST00000580852 62 ntBASIC20.38■□□□□ 0.85
SDHAP31040 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.38■□□□□ 0.85
SDHAP31040 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.38■□□□□ 0.85
SDHAP31040 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAP31040 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDHAP31040 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SDHAP31040 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SDHAP31040 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SDHAP31040 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SDHAP31040 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.37■□□□□ 0.85
SDHAP31040 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.37■□□□□ 0.85
SDHAP31040 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDHAP31040 AF131216.4-201ENST00000638924 1588 ntBASIC20.37■□□□□ 0.85
SDHAP31040 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SDHAP31040 C9orf163-202ENST00000624034 2573 ntBASIC20.37■□□□□ 0.85
SDHAP31040 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SDHAP31040 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDHAP31040 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SDHAP31040 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.36■□□□□ 0.85
SDHAP31040 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.36■□□□□ 0.85
SDHAP31040 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SDHAP31040 AC012354.3-201ENST00000623734 483 ntBASIC20.36■□□□□ 0.85
SDHAP31040 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.36■□□□□ 0.85
SDHAP31040 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDHAP31040 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SDHAP31040 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDHAP31040 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDHAP31040 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SDHAP31040 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.35■□□□□ 0.85
SDHAP31040 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.35■□□□□ 0.85
SDHAP31040 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDHAP31040 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDHAP31040 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.35■□□□□ 0.85
SDHAP31040 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SDHAP31040 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.35■□□□□ 0.85
SDHAP31040 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SDHAP31040 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.35■□□□□ 0.85
SDHAP31040 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.35■□□□□ 0.85
SDHAP31040 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDHAP31040 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SDHAP31040 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDHAP31040 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.34■□□□□ 0.85
SDHAP31040 DUSP8P3-201ENST00000399571 1760 ntBASIC20.34■□□□□ 0.85
SDHAP31040 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.34■□□□□ 0.85
SDHAP31040 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SDHAP31040 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.34■□□□□ 0.85
SDHAP31040 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SDHAP31040 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SDHAP31040 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDHAP31040 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDHAP31040 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDHAP31040 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SDHAP31040 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SDHAP31040 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDHAP31040 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDHAP31040 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.33■□□□□ 0.85
SDHAP31040 MIR4508-201ENST00000584178 70 ntBASIC20.33■□□□□ 0.85
SDHAP31040 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SDHAP31040 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SDHAP31040 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SDHAP31040 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAP31040 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAP31040 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.32■□□□□ 0.84
SDHAP31040 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.32■□□□□ 0.84
SDHAP31040 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAP31040 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.32■□□□□ 0.84
SDHAP31040 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAP31040 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.32■□□□□ 0.84
SDHAP31040 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.32■□□□□ 0.84
SDHAP31040 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SDHAP31040 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAP31040 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAP31040 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAP31040 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAP31040 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SDHAP31040 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms