Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC6A1P30531 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC6A1P30531 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC6A1P30531 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SLC6A1P30531 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A1P30531 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A1P30531 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A1P30531 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A1P30531 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A1P30531 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC6A1P30531 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SLC6A1P30531 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A1P30531 RARRES2P2-201ENST00000394842 485 ntBASIC19.61■□□□□ 0.73
SLC6A1P30531 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A1P30531 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.61■□□□□ 0.73
SLC6A1P30531 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A1P30531 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLC6A1P30531 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A1P30531 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A1P30531 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A1P30531 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A1P30531 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A1P30531 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SLC6A1P30531 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SLC6A1P30531 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC6A1P30531 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SLC6A1P30531 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A1P30531 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A1P30531 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC6A1P30531 AC126177.7-201ENST00000547904 679 ntBASIC19.6■□□□□ 0.73
SLC6A1P30531 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A1P30531 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SLC6A1P30531 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SLC6A1P30531 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC6A1P30531 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SLC6A1P30531 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A1P30531 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A1P30531 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A1P30531 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SLC6A1P30531 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A1P30531 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
SLC6A1P30531 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SLC6A1P30531 AC022413.1-201ENST00000624602 984 ntBASIC19.59■□□□□ 0.73
SLC6A1P30531 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A1P30531 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.58■□□□□ 0.73
SLC6A1P30531 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.58■□□□□ 0.73
SLC6A1P30531 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SLC6A1P30531 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A1P30531 AC242852.2-201ENST00000615738 1807 ntBASIC19.58■□□□□ 0.73
SLC6A1P30531 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A1P30531 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A1P30531 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A1P30531 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A1P30531 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.58■□□□□ 0.72
SLC6A1P30531 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC6A1P30531 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A1P30531 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A1P30531 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A1P30531 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A1P30531 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SLC6A1P30531 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A1P30531 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SLC6A1P30531 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A1P30531 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC6A1P30531 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A1P30531 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SLC6A1P30531 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A1P30531 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A1P30531 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A1P30531 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A1P30531 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A1P30531 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SLC6A1P30531 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A1P30531 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC6A1P30531 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A1P30531 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SLC6A1P30531 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A1P30531 ABHD17AP5-201ENST00000580133 923 ntBASIC19.56■□□□□ 0.72
SLC6A1P30531 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SLC6A1P30531 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC6A1P30531 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A1P30531 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC6A1P30531 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC6A1P30531 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A1P30531 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A1P30531 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A1P30531 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A1P30531 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A1P30531 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC6A1P30531 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A1P30531 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A1P30531 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A1P30531 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A1P30531 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A1P30531 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SLC6A1P30531 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A1P30531 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A1P30531 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A1P30531 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC6A1P30531 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms