Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL11A2P13942 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL11A2P13942 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC28.41■■■□□ 2.14
COL11A2P13942 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
COL11A2P13942 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.41■■■□□ 2.14
COL11A2P13942 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.41■■■□□ 2.14
COL11A2P13942 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL11A2P13942 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.41■■■□□ 2.14
COL11A2P13942 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL11A2P13942 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL11A2P13942 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.4■■■□□ 2.14
COL11A2P13942 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
COL11A2P13942 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.4■■■□□ 2.14
COL11A2P13942 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
COL11A2P13942 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
COL11A2P13942 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL11A2P13942 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL11A2P13942 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.39■■■□□ 2.14
COL11A2P13942 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
COL11A2P13942 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
COL11A2P13942 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.39■■■□□ 2.14
COL11A2P13942 AC012414.1-201ENST00000556676 535 ntBASIC28.39■■■□□ 2.14
COL11A2P13942 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.39■■■□□ 2.14
COL11A2P13942 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.13
COL11A2P13942 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
COL11A2P13942 DENND3-207ENST00000518347 850 ntTSL 2 BASIC28.38■■■□□ 2.13
COL11A2P13942 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC28.38■■■□□ 2.13
COL11A2P13942 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
COL11A2P13942 TSPY26P-201ENST00000476365 1326 ntBASIC28.38■■■□□ 2.13
COL11A2P13942 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC28.38■■■□□ 2.13
COL11A2P13942 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC28.38■■■□□ 2.13
COL11A2P13942 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
COL11A2P13942 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
COL11A2P13942 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
COL11A2P13942 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
COL11A2P13942 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
COL11A2P13942 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.37■■■□□ 2.13
COL11A2P13942 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
COL11A2P13942 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.37■■■□□ 2.13
COL11A2P13942 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
COL11A2P13942 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL11A2P13942 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL11A2P13942 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL11A2P13942 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL11A2P13942 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL11A2P13942 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC28.36■■■□□ 2.13
COL11A2P13942 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC28.36■■■□□ 2.13
COL11A2P13942 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.36■■■□□ 2.13
COL11A2P13942 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.35■■■□□ 2.13
COL11A2P13942 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.35■■■□□ 2.13
COL11A2P13942 AC092803.2-201ENST00000564287 1899 ntBASIC28.35■■■□□ 2.13
COL11A2P13942 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
COL11A2P13942 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
COL11A2P13942 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
COL11A2P13942 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.35■■■□□ 2.13
COL11A2P13942 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
COL11A2P13942 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
COL11A2P13942 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.34■■■□□ 2.13
COL11A2P13942 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.34■■■□□ 2.13
COL11A2P13942 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC28.34■■■□□ 2.13
COL11A2P13942 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC28.34■■■□□ 2.13
COL11A2P13942 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
COL11A2P13942 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC28.34■■■□□ 2.13
COL11A2P13942 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
COL11A2P13942 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
COL11A2P13942 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
COL11A2P13942 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
COL11A2P13942 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.33■■■□□ 2.13
COL11A2P13942 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
COL11A2P13942 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.33■■■□□ 2.13
COL11A2P13942 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.32■■■□□ 2.12
COL11A2P13942 ME3-201ENST00000323418 1068 ntTSL 5 BASIC28.32■■■□□ 2.12
COL11A2P13942 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC28.32■■■□□ 2.12
COL11A2P13942 AC126544.1-201ENST00000580842 1059 ntBASIC28.32■■■□□ 2.12
COL11A2P13942 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
COL11A2P13942 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
COL11A2P13942 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.32■■■□□ 2.12
COL11A2P13942 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
COL11A2P13942 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
COL11A2P13942 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
COL11A2P13942 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.31■■■□□ 2.12
COL11A2P13942 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
COL11A2P13942 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
COL11A2P13942 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
COL11A2P13942 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
COL11A2P13942 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC28.31■■■□□ 2.12
COL11A2P13942 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC28.31■■■□□ 2.12
COL11A2P13942 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
COL11A2P13942 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.31■■■□□ 2.12
COL11A2P13942 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC28.3■■■□□ 2.12
COL11A2P13942 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.3■■■□□ 2.12
COL11A2P13942 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
COL11A2P13942 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.3■■■□□ 2.12
COL11A2P13942 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
COL11A2P13942 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
COL11A2P13942 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC28.3■■■□□ 2.12
COL11A2P13942 IGHV3-19-201ENST00000521488 291 ntBASIC28.3■■■□□ 2.12
COL11A2P13942 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC28.3■■■□□ 2.12
COL11A2P13942 AL022069.1-201ENST00000568025 1636 ntBASIC28.3■■■□□ 2.12
COL11A2P13942 SLC6A10P-202ENST00000431994 2058 ntBASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms