Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
RARAP10276 AC131274.2-201ENST00000580697 1507 ntBASIC23.93■■□□□ 1.42
RARAP10276 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RARAP10276 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
RARAP10276 AL161729.1-201ENST00000604104 1402 ntBASIC23.93■■□□□ 1.42
RARAP10276 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RARAP10276 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RARAP10276 AC079834.2-201ENST00000609776 1949 ntBASIC23.92■■□□□ 1.42
RARAP10276 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RARAP10276 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RARAP10276 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RARAP10276 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RARAP10276 AF131216.4-201ENST00000638924 1588 ntBASIC23.92■■□□□ 1.42
RARAP10276 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RARAP10276 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.92■■□□□ 1.42
RARAP10276 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.92■■□□□ 1.42
RARAP10276 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RARAP10276 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RARAP10276 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.92■■□□□ 1.42
RARAP10276 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.92■■□□□ 1.42
RARAP10276 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.92■■□□□ 1.42
RARAP10276 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RARAP10276 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RARAP10276 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RARAP10276 AL022069.1-201ENST00000568025 1636 ntBASIC23.92■■□□□ 1.42
RARAP10276 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RARAP10276 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RARAP10276 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
RARAP10276 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RARAP10276 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RARAP10276 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.91■■□□□ 1.42
RARAP10276 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RARAP10276 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.91■■□□□ 1.42
RARAP10276 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.91■■□□□ 1.42
RARAP10276 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RARAP10276 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.91■■□□□ 1.42
RARAP10276 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
RARAP10276 AC103724.3-201ENST00000564481 992 ntBASIC23.9■■□□□ 1.42
RARAP10276 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RARAP10276 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.9■■□□□ 1.42
RARAP10276 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RARAP10276 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.42
RARAP10276 YBX1P4-201ENST00000392794 808 ntBASIC23.89■■□□□ 1.41
RARAP10276 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.89■■□□□ 1.41
RARAP10276 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
RARAP10276 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RARAP10276 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RARAP10276 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RARAP10276 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.88■■□□□ 1.41
RARAP10276 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.88■■□□□ 1.41
RARAP10276 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.88■■□□□ 1.41
RARAP10276 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.88■■□□□ 1.41
RARAP10276 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.88■■□□□ 1.41
RARAP10276 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
RARAP10276 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
RARAP10276 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
RARAP10276 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RARAP10276 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RARAP10276 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RARAP10276 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RARAP10276 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RARAP10276 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.87■■□□□ 1.41
RARAP10276 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RARAP10276 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.86■■□□□ 1.41
RARAP10276 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.86■■□□□ 1.41
RARAP10276 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.86■■□□□ 1.41
RARAP10276 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.86■■□□□ 1.41
RARAP10276 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.86■■□□□ 1.41
RARAP10276 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RARAP10276 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RARAP10276 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RARAP10276 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RARAP10276 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RARAP10276 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RARAP10276 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RARAP10276 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RARAP10276 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.85■■□□□ 1.41
RARAP10276 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RARAP10276 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
RARAP10276 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.84■■□□□ 1.41
RARAP10276 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RARAP10276 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RARAP10276 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RARAP10276 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.84■■□□□ 1.41
RARAP10276 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RARAP10276 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RARAP10276 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.84■■□□□ 1.41
RARAP10276 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RARAP10276 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RARAP10276 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RARAP10276 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
RARAP10276 CLDN5-201ENST00000403084 2357 ntBASIC23.83■■□□□ 1.41
RARAP10276 ANOS2P-203ENST00000472227 1816 ntBASIC23.83■■□□□ 1.41
RARAP10276 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.83■■□□□ 1.41
RARAP10276 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RARAP10276 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RARAP10276 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RARAP10276 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RARAP10276 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.82■■□□□ 1.4
RARAP10276 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms