Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26■■□□□ 1.75
HOXC6P09630 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
HOXC6P09630 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
HOXC6P09630 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26■■□□□ 1.75
HOXC6P09630 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HOXC6P09630 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26■■□□□ 1.75
HOXC6P09630 AC006455.2-201ENST00000429931 906 ntBASIC26■■□□□ 1.75
HOXC6P09630 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26■■□□□ 1.75
HOXC6P09630 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26■■□□□ 1.75
HOXC6P09630 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26■■□□□ 1.75
HOXC6P09630 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.99■■□□□ 1.75
HOXC6P09630 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HOXC6P09630 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HOXC6P09630 MIR3181-201ENST00000578512 73 ntBASIC25.99■■□□□ 1.75
HOXC6P09630 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
HOXC6P09630 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.99■■□□□ 1.75
HOXC6P09630 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HOXC6P09630 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
HOXC6P09630 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
HOXC6P09630 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.98■■□□□ 1.75
HOXC6P09630 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.98■■□□□ 1.75
HOXC6P09630 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
HOXC6P09630 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
HOXC6P09630 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.97■■□□□ 1.75
HOXC6P09630 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.97■■□□□ 1.75
HOXC6P09630 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.97■■□□□ 1.75
HOXC6P09630 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
HOXC6P09630 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
HOXC6P09630 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HOXC6P09630 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HOXC6P09630 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.96■■□□□ 1.75
HOXC6P09630 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HOXC6P09630 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.96■■□□□ 1.75
HOXC6P09630 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
HOXC6P09630 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
HOXC6P09630 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HOXC6P09630 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HOXC6P09630 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
HOXC6P09630 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.95■■□□□ 1.74
HOXC6P09630 AC009086.3-201ENST00000623486 1008 ntBASIC25.95■■□□□ 1.74
HOXC6P09630 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
HOXC6P09630 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.95■■□□□ 1.74
HOXC6P09630 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
HOXC6P09630 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
HOXC6P09630 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
HOXC6P09630 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
HOXC6P09630 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.94■■□□□ 1.74
HOXC6P09630 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.94■■□□□ 1.74
HOXC6P09630 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
HOXC6P09630 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.94■■□□□ 1.74
HOXC6P09630 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
HOXC6P09630 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.94■■□□□ 1.74
HOXC6P09630 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.93■■□□□ 1.74
HOXC6P09630 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.93■■□□□ 1.74
HOXC6P09630 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.93■■□□□ 1.74
HOXC6P09630 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
HOXC6P09630 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
HOXC6P09630 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.93■■□□□ 1.74
HOXC6P09630 DUSP8P4-201ENST00000399538 1761 ntBASIC25.92■■□□□ 1.74
HOXC6P09630 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
HOXC6P09630 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
HOXC6P09630 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.92■■□□□ 1.74
HOXC6P09630 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.92■■□□□ 1.74
HOXC6P09630 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
HOXC6P09630 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.91■■□□□ 1.74
HOXC6P09630 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.91■■□□□ 1.74
HOXC6P09630 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.91■■□□□ 1.74
HOXC6P09630 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.91■■□□□ 1.74
HOXC6P09630 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.91■■□□□ 1.74
HOXC6P09630 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
HOXC6P09630 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HOXC6P09630 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.9■■□□□ 1.74
HOXC6P09630 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
HOXC6P09630 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
HOXC6P09630 AC034268.1-201ENST00000441047 882 ntBASIC25.9■■□□□ 1.74
HOXC6P09630 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.9■■□□□ 1.74
HOXC6P09630 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.9■■□□□ 1.74
HOXC6P09630 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
HOXC6P09630 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
HOXC6P09630 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
HOXC6P09630 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.74
HOXC6P09630 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.74
HOXC6P09630 AC145676.1-201ENST00000514988 2004 ntBASIC25.89■■□□□ 1.74
HOXC6P09630 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.89■■□□□ 1.74
HOXC6P09630 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
HOXC6P09630 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.89■■□□□ 1.74
HOXC6P09630 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
HOXC6P09630 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
HOXC6P09630 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HOXC6P09630 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
HOXC6P09630 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HOXC6P09630 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
HOXC6P09630 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
HOXC6P09630 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.88■■□□□ 1.73
HOXC6P09630 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.88■■□□□ 1.73
HOXC6P09630 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.88■■□□□ 1.73
HOXC6P09630 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
HOXC6P09630 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.88■■□□□ 1.73
HOXC6P09630 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
HOXC6P09630 AL161729.1-201ENST00000604104 1402 ntBASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms