Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.99■■□□□ 1.59
TPM1P09493 AC090877.2-201ENST00000558441 1738 ntBASIC24.99■■□□□ 1.59
TPM1P09493 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
TPM1P09493 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
TPM1P09493 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TPM1P09493 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TPM1P09493 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TPM1P09493 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.98■■□□□ 1.59
TPM1P09493 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TPM1P09493 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TPM1P09493 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.98■■□□□ 1.59
TPM1P09493 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TPM1P09493 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
TPM1P09493 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
TPM1P09493 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
TPM1P09493 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.97■■□□□ 1.59
TPM1P09493 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
TPM1P09493 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TPM1P09493 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TPM1P09493 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
TPM1P09493 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TPM1P09493 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.97■■□□□ 1.59
TPM1P09493 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TPM1P09493 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.97■■□□□ 1.59
TPM1P09493 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TPM1P09493 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TPM1P09493 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
TPM1P09493 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.96■■□□□ 1.59
TPM1P09493 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
TPM1P09493 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.96■■□□□ 1.59
TPM1P09493 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
TPM1P09493 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TPM1P09493 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.96■■□□□ 1.59
TPM1P09493 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
TPM1P09493 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
TPM1P09493 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
TPM1P09493 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.59
TPM1P09493 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
TPM1P09493 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.95■■□□□ 1.58
TPM1P09493 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
TPM1P09493 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
TPM1P09493 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
TPM1P09493 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
TPM1P09493 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TPM1P09493 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
TPM1P09493 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.94■■□□□ 1.58
TPM1P09493 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TPM1P09493 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TPM1P09493 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TPM1P09493 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
TPM1P09493 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TPM1P09493 AC092068.2-201ENST00000590491 1708 ntBASIC24.94■■□□□ 1.58
TPM1P09493 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.94■■□□□ 1.58
TPM1P09493 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TPM1P09493 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC24.93■■□□□ 1.58
TPM1P09493 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TPM1P09493 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.93■■□□□ 1.58
TPM1P09493 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.93■■□□□ 1.58
TPM1P09493 GPX1-201ENST00000419349 1106 ntBASIC24.93■■□□□ 1.58
TPM1P09493 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.93■■□□□ 1.58
TPM1P09493 AC133552.2-201ENST00000619106 1032 ntBASIC24.93■■□□□ 1.58
TPM1P09493 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TPM1P09493 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC24.93■■□□□ 1.58
TPM1P09493 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC24.93■■□□□ 1.58
TPM1P09493 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
TPM1P09493 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.93■■□□□ 1.58
TPM1P09493 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TPM1P09493 AC233723.2-201ENST00000623798 2106 ntBASIC24.92■■□□□ 1.58
TPM1P09493 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TPM1P09493 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.92■■□□□ 1.58
TPM1P09493 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TPM1P09493 RPS2P7-201ENST00000447334 885 ntBASIC24.92■■□□□ 1.58
TPM1P09493 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.92■■□□□ 1.58
TPM1P09493 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TPM1P09493 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.92■■□□□ 1.58
TPM1P09493 AC009831.1-201ENST00000580420 1582 ntBASIC24.92■■□□□ 1.58
TPM1P09493 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
TPM1P09493 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.92■■□□□ 1.58
TPM1P09493 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.92■■□□□ 1.58
TPM1P09493 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
TPM1P09493 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC24.91■■□□□ 1.58
TPM1P09493 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TPM1P09493 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.91■■□□□ 1.58
TPM1P09493 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
TPM1P09493 DUSP8P3-201ENST00000399571 1760 ntBASIC24.9■■□□□ 1.58
TPM1P09493 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.9■■□□□ 1.58
TPM1P09493 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TPM1P09493 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.9■■□□□ 1.58
TPM1P09493 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.9■■□□□ 1.58
TPM1P09493 AL592295.1-201ENST00000400984 884 ntBASIC24.9■■□□□ 1.58
TPM1P09493 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TPM1P09493 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.9■■□□□ 1.58
TPM1P09493 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
TPM1P09493 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.9■■□□□ 1.58
TPM1P09493 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.9■■□□□ 1.58
TPM1P09493 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TPM1P09493 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
TPM1P09493 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
TPM1P09493 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TPM1P09493 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms