Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CD48P09326 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CD48P09326 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.67■■□□□ 1.38
CD48P09326 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
CD48P09326 DUSP8P5-201ENST00000422884 1815 ntBASIC23.67■■□□□ 1.38
CD48P09326 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CD48P09326 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CD48P09326 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CD48P09326 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CD48P09326 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CD48P09326 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CD48P09326 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CD48P09326 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.66■■□□□ 1.38
CD48P09326 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CD48P09326 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CD48P09326 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.66■■□□□ 1.38
CD48P09326 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.66■■□□□ 1.38
CD48P09326 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CD48P09326 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CD48P09326 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.66■■□□□ 1.38
CD48P09326 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.66■■□□□ 1.38
CD48P09326 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CD48P09326 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CD48P09326 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.65■■□□□ 1.38
CD48P09326 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CD48P09326 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CD48P09326 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CD48P09326 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CD48P09326 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.64■■□□□ 1.38
CD48P09326 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.64■■□□□ 1.38
CD48P09326 C9orf163-202ENST00000624034 2573 ntBASIC23.64■■□□□ 1.38
CD48P09326 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CD48P09326 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.64■■□□□ 1.38
CD48P09326 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CD48P09326 AC004448.1-201ENST00000458332 883 ntBASIC23.64■■□□□ 1.37
CD48P09326 RARRES2P1-201ENST00000474487 481 ntBASIC23.64■■□□□ 1.37
CD48P09326 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.64■■□□□ 1.37
CD48P09326 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CD48P09326 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.64■■□□□ 1.37
CD48P09326 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.64■■□□□ 1.37
CD48P09326 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CD48P09326 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CD48P09326 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CD48P09326 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CD48P09326 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
CD48P09326 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CD48P09326 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CD48P09326 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.63■■□□□ 1.37
CD48P09326 AC137630.3-201ENST00000607245 391 ntBASIC23.63■■□□□ 1.37
CD48P09326 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CD48P09326 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CD48P09326 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.63■■□□□ 1.37
CD48P09326 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.62■■□□□ 1.37
CD48P09326 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CD48P09326 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CD48P09326 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CD48P09326 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CD48P09326 ANOS2P-203ENST00000472227 1816 ntBASIC23.62■■□□□ 1.37
CD48P09326 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.62■■□□□ 1.37
CD48P09326 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CD48P09326 AC133561.1-201ENST00000568600 2415 ntBASIC23.61■■□□□ 1.37
CD48P09326 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.61■■□□□ 1.37
CD48P09326 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
CD48P09326 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CD48P09326 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.61■■□□□ 1.37
CD48P09326 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.61■■□□□ 1.37
CD48P09326 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.61■■□□□ 1.37
CD48P09326 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CD48P09326 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.61■■□□□ 1.37
CD48P09326 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.61■■□□□ 1.37
CD48P09326 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CD48P09326 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CD48P09326 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.6■■□□□ 1.37
CD48P09326 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
CD48P09326 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CD48P09326 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.6■■□□□ 1.37
CD48P09326 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.6■■□□□ 1.37
CD48P09326 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
CD48P09326 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CD48P09326 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CD48P09326 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CD48P09326 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.59■■□□□ 1.37
CD48P09326 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CD48P09326 SNX5-217ENST00000606557 1087 ntBASIC23.59■■□□□ 1.37
CD48P09326 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD48P09326 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD48P09326 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD48P09326 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
CD48P09326 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.59■■□□□ 1.37
CD48P09326 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD48P09326 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CD48P09326 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
CD48P09326 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CD48P09326 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CD48P09326 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
CD48P09326 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CD48P09326 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
CD48P09326 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.58■■□□□ 1.37
CD48P09326 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
CD48P09326 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms