Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23■■□□□ 1.27
RETP07949 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23■■□□□ 1.27
RETP07949 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RETP07949 AK1-201ENST00000223836 736 ntTSL 3 BASIC23■■□□□ 1.27
RETP07949 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23■■□□□ 1.27
RETP07949 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23■■□□□ 1.27
RETP07949 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23■■□□□ 1.27
RETP07949 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23■■□□□ 1.27
RETP07949 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RETP07949 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23■■□□□ 1.27
RETP07949 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RETP07949 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RETP07949 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RETP07949 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.99■■□□□ 1.27
RETP07949 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RETP07949 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.99■■□□□ 1.27
RETP07949 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.99■■□□□ 1.27
RETP07949 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.99■■□□□ 1.27
RETP07949 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RETP07949 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RETP07949 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RETP07949 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.98■■□□□ 1.27
RETP07949 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.98■■□□□ 1.27
RETP07949 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETP07949 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETP07949 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETP07949 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RETP07949 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.98■■□□□ 1.27
RETP07949 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RETP07949 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.98■■□□□ 1.27
RETP07949 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.98■■□□□ 1.27
RETP07949 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RETP07949 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RETP07949 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RETP07949 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RETP07949 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.97■■□□□ 1.27
RETP07949 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RETP07949 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.97■■□□□ 1.27
RETP07949 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.97■■□□□ 1.27
RETP07949 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RETP07949 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RETP07949 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RETP07949 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.97■■□□□ 1.27
RETP07949 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
RETP07949 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RETP07949 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RETP07949 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RETP07949 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RETP07949 SLC47A1P1-202ENST00000449666 945 ntBASIC22.96■■□□□ 1.27
RETP07949 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RETP07949 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RETP07949 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RETP07949 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RETP07949 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RETP07949 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
RETP07949 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.95■■□□□ 1.26
RETP07949 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RETP07949 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.95■■□□□ 1.26
RETP07949 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.95■■□□□ 1.26
RETP07949 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.95■■□□□ 1.26
RETP07949 AC099791.2-201ENST00000605725 427 ntBASIC22.95■■□□□ 1.26
RETP07949 AC010501.1-201ENST00000606270 1962 ntBASIC22.95■■□□□ 1.26
RETP07949 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RETP07949 ERN1-208ENST00000606895 2068 ntBASIC22.94■■□□□ 1.26
RETP07949 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
RETP07949 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.94■■□□□ 1.26
RETP07949 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RETP07949 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RETP07949 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RETP07949 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RETP07949 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
RETP07949 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RETP07949 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RETP07949 ID1-201ENST00000376105 1233 ntBASIC22.93■■□□□ 1.26
RETP07949 KRT18P5-201ENST00000436075 1291 ntBASIC22.93■■□□□ 1.26
RETP07949 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RETP07949 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RETP07949 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.92■■□□□ 1.26
RETP07949 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RETP07949 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RETP07949 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RETP07949 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.92■■□□□ 1.26
RETP07949 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RETP07949 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.92■■□□□ 1.26
RETP07949 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.91■■□□□ 1.26
RETP07949 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.91■■□□□ 1.26
RETP07949 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RETP07949 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.91■■□□□ 1.26
RETP07949 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.91■■□□□ 1.26
RETP07949 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
RETP07949 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.91■■□□□ 1.26
RETP07949 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RETP07949 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RETP07949 AC092437.1-201ENST00000624794 1048 ntBASIC22.9■■□□□ 1.26
RETP07949 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.9■■□□□ 1.26
RETP07949 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
RETP07949 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RETP07949 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
RETP07949 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
RETP07949 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms