Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
HLA-DQB2P05538 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
HLA-DQB2P05538 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HLA-DQB2P05538 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.19■■□□□ 1.3
HLA-DQB2P05538 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HLA-DQB2P05538 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HLA-DQB2P05538 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.18■■□□□ 1.3
HLA-DQB2P05538 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HLA-DQB2P05538 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HLA-DQB2P05538 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.18■■□□□ 1.3
HLA-DQB2P05538 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HLA-DQB2P05538 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HLA-DQB2P05538 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
HLA-DQB2P05538 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.17■■□□□ 1.3
HLA-DQB2P05538 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HLA-DQB2P05538 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.17■■□□□ 1.3
HLA-DQB2P05538 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.17■■□□□ 1.3
HLA-DQB2P05538 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
HLA-DQB2P05538 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.17■■□□□ 1.3
HLA-DQB2P05538 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HLA-DQB2P05538 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
HLA-DQB2P05538 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
HLA-DQB2P05538 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
HLA-DQB2P05538 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HLA-DQB2P05538 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HLA-DQB2P05538 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
HLA-DQB2P05538 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HLA-DQB2P05538 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HLA-DQB2P05538 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.16■■□□□ 1.3
HLA-DQB2P05538 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.16■■□□□ 1.3
HLA-DQB2P05538 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
HLA-DQB2P05538 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HLA-DQB2P05538 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HLA-DQB2P05538 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
HLA-DQB2P05538 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HLA-DQB2P05538 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HLA-DQB2P05538 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
HLA-DQB2P05538 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.15■■□□□ 1.3
HLA-DQB2P05538 TSPY9P-201ENST00000440215 945 ntBASIC23.15■■□□□ 1.3
HLA-DQB2P05538 TSPY11P-201ENST00000442607 1045 ntBASIC23.15■■□□□ 1.3
HLA-DQB2P05538 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.15■■□□□ 1.3
HLA-DQB2P05538 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.15■■□□□ 1.3
HLA-DQB2P05538 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
HLA-DQB2P05538 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.14■■□□□ 1.3
HLA-DQB2P05538 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.3
HLA-DQB2P05538 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
HLA-DQB2P05538 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 MIR6722-201ENST00000617286 78 ntBASIC23.14■■□□□ 1.29
HLA-DQB2P05538 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HLA-DQB2P05538 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HLA-DQB2P05538 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HLA-DQB2P05538 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
HLA-DQB2P05538 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
HLA-DQB2P05538 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.13■■□□□ 1.29
HLA-DQB2P05538 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.13■■□□□ 1.29
HLA-DQB2P05538 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HLA-DQB2P05538 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HLA-DQB2P05538 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
HLA-DQB2P05538 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
HLA-DQB2P05538 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HLA-DQB2P05538 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HLA-DQB2P05538 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HLA-DQB2P05538 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
HLA-DQB2P05538 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HLA-DQB2P05538 UNC93B8-201ENST00000511903 705 ntBASIC23.12■■□□□ 1.29
HLA-DQB2P05538 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
HLA-DQB2P05538 MTDHP2-201ENST00000601468 714 ntBASIC23.12■■□□□ 1.29
HLA-DQB2P05538 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HLA-DQB2P05538 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.12■■□□□ 1.29
HLA-DQB2P05538 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HLA-DQB2P05538 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.11■■□□□ 1.29
HLA-DQB2P05538 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
HLA-DQB2P05538 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HLA-DQB2P05538 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.1■■□□□ 1.29
HLA-DQB2P05538 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HLA-DQB2P05538 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.1■■□□□ 1.29
HLA-DQB2P05538 GUSBP5-201ENST00000418136 578 ntBASIC23.1■■□□□ 1.29
HLA-DQB2P05538 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.1■■□□□ 1.29
HLA-DQB2P05538 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HLA-DQB2P05538 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HLA-DQB2P05538 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HLA-DQB2P05538 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.1■■□□□ 1.29
HLA-DQB2P05538 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HLA-DQB2P05538 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
HLA-DQB2P05538 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms