Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.85■□□□□ 0.93
P04436 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
P04436 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04436 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.85■□□□□ 0.93
P04436 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
P04436 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.85■□□□□ 0.93
P04436 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04436 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04436 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04436 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04436 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
P04436 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04436 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04436 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
P04436 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04436 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
P04436 ALDH1A3-203ENST00000557963 1670 ntBASIC20.84■□□□□ 0.93
P04436 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.84■□□□□ 0.93
P04436 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04436 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.84■□□□□ 0.93
P04436 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04436 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
P04436 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.83■□□□□ 0.93
P04436 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.83■□□□□ 0.93
P04436 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
P04436 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
P04436 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
P04436 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
P04436 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
P04436 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
P04436 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04436 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04436 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.82■□□□□ 0.92
P04436 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.82■□□□□ 0.92
P04436 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.82■□□□□ 0.92
P04436 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.82■□□□□ 0.92
P04436 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04436 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04436 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04436 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
P04436 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.81■□□□□ 0.92
P04436 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.81■□□□□ 0.92
P04436 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P04436 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.81■□□□□ 0.92
P04436 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
P04436 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.81■□□□□ 0.92
P04436 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.81■□□□□ 0.92
P04436 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04436 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.8■□□□□ 0.92
P04436 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.8■□□□□ 0.92
P04436 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
P04436 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04436 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04436 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04436 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.79■□□□□ 0.92
P04436 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
P04436 AL139246.5-201ENST00000606645 996 ntBASIC20.79■□□□□ 0.92
P04436 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
P04436 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04436 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.79■□□□□ 0.92
P04436 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04436 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
P04436 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04436 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P04436 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04436 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04436 AC096631.2-201ENST00000436136 790 ntBASIC20.78■□□□□ 0.92
P04436 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.78■□□□□ 0.92
P04436 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P04436 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P04436 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.78■□□□□ 0.92
P04436 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04436 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.77■□□□□ 0.92
P04436 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04436 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04436 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.77■□□□□ 0.92
P04436 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.77■□□□□ 0.92
P04436 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.77■□□□□ 0.92
P04436 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04436 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
P04436 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.77■□□□□ 0.92
P04436 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.77■□□□□ 0.92
P04436 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04436 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
P04436 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
P04436 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04436 AC141586.4-201ENST00000624558 1573 ntBASIC20.76■□□□□ 0.91
P04436 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04436 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.76■□□□□ 0.91
P04436 AC009102.2-201ENST00000606772 1639 ntBASIC20.76■□□□□ 0.91
P04436 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.76■□□□□ 0.91
P04436 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04436 AC092171.4-201ENST00000609130 632 ntBASIC20.76■□□□□ 0.91
P04436 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.76■□□□□ 0.91
P04436 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04436 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04436 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04436 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04436 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
P04436 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms