Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB1P01920 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HLA-DQB1P01920 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DQB1P01920 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB1P01920 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DQB1P01920 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQB1P01920 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
HLA-DQB1P01920 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
HLA-DQB1P01920 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.72■□□□□ 0.75
HLA-DQB1P01920 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HLA-DQB1P01920 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB1P01920 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB1P01920 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB1P01920 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.72■□□□□ 0.75
HLA-DQB1P01920 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB1P01920 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB1P01920 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB1P01920 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQB1P01920 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HLA-DQB1P01920 AL121603.2-201ENST00000557373 2117 ntBASIC19.72■□□□□ 0.75
HLA-DQB1P01920 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.72■□□□□ 0.75
HLA-DQB1P01920 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HLA-DQB1P01920 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQB1P01920 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DQB1P01920 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQB1P01920 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQB1P01920 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQB1P01920 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQB1P01920 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.71■□□□□ 0.75
HLA-DQB1P01920 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQB1P01920 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQB1P01920 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQB1P01920 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB1P01920 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.7■□□□□ 0.74
HLA-DQB1P01920 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB1P01920 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DQB1P01920 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB1P01920 MIR3648-2-201ENST00000581792 180 ntBASIC19.7■□□□□ 0.74
HLA-DQB1P01920 MIR3648-1-201ENST00000615959 180 ntBASIC19.7■□□□□ 0.74
HLA-DQB1P01920 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQB1P01920 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQB1P01920 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HLA-DQB1P01920 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
HLA-DQB1P01920 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HLA-DQB1P01920 AC025884.2-201ENST00000553429 711 ntBASIC19.69■□□□□ 0.74
HLA-DQB1P01920 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.69■□□□□ 0.74
HLA-DQB1P01920 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.69■□□□□ 0.74
HLA-DQB1P01920 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQB1P01920 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQB1P01920 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQB1P01920 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB1P01920 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.68■□□□□ 0.74
HLA-DQB1P01920 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB1P01920 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DQB1P01920 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB1P01920 ESRRAP2-201ENST00000418437 1549 ntBASIC19.68■□□□□ 0.74
HLA-DQB1P01920 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB1P01920 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DQB1P01920 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DQB1P01920 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB1P01920 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB1P01920 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB1P01920 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB1P01920 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB1P01920 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB1P01920 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB1P01920 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.67■□□□□ 0.74
HLA-DQB1P01920 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB1P01920 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-DQB1P01920 ABHD17AP4-201ENST00000411545 909 ntBASIC19.67■□□□□ 0.74
HLA-DQB1P01920 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HLA-DQB1P01920 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
HLA-DQB1P01920 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB1P01920 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB1P01920 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB1P01920 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB1P01920 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB1P01920 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB1P01920 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB1P01920 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB1P01920 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-DQB1P01920 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB1P01920 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB1P01920 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms