Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQA2P01906 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQA2P01906 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.36■□□□□ 0.85
HLA-DQA2P01906 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQA2P01906 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.36■□□□□ 0.85
HLA-DQA2P01906 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-DQA2P01906 AL022069.1-201ENST00000568025 1636 ntBASIC20.35■□□□□ 0.85
HLA-DQA2P01906 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.35■□□□□ 0.85
HLA-DQA2P01906 AC022616.5-201ENST00000518796 181 ntBASIC20.35■□□□□ 0.85
HLA-DQA2P01906 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HLA-DQA2P01906 AL161729.1-201ENST00000604104 1402 ntBASIC20.35■□□□□ 0.85
HLA-DQA2P01906 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 AC019171.1-201ENST00000601251 1056 ntBASIC20.34■□□□□ 0.85
HLA-DQA2P01906 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HLA-DQA2P01906 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.33■□□□□ 0.85
HLA-DQA2P01906 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
HLA-DQA2P01906 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DQA2P01906 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
HLA-DQA2P01906 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.33■□□□□ 0.85
HLA-DQA2P01906 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.33■□□□□ 0.85
HLA-DQA2P01906 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
HLA-DQA2P01906 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HLA-DQA2P01906 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DQA2P01906 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.33■□□□□ 0.84
HLA-DQA2P01906 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HLA-DQA2P01906 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.33■□□□□ 0.84
HLA-DQA2P01906 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 AC004987.1-201ENST00000428627 508 ntBASIC20.32■□□□□ 0.84
HLA-DQA2P01906 ATP5G2P3-201ENST00000429083 425 ntBASIC20.32■□□□□ 0.84
HLA-DQA2P01906 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQA2P01906 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DQA2P01906 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.84
HLA-DQA2P01906 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQA2P01906 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
HLA-DQA2P01906 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.31■□□□□ 0.84
HLA-DQA2P01906 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.31■□□□□ 0.84
HLA-DQA2P01906 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.31■□□□□ 0.84
HLA-DQA2P01906 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQA2P01906 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQA2P01906 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQA2P01906 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA2P01906 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HLA-DQA2P01906 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA2P01906 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA2P01906 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA2P01906 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA2P01906 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA2P01906 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA2P01906 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA2P01906 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.3■□□□□ 0.84
HLA-DQA2P01906 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQA2P01906 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA2P01906 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA2P01906 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA2P01906 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA2P01906 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA2P01906 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA2P01906 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HLA-DQA2P01906 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HLA-DQA2P01906 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA2P01906 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQA2P01906 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQA2P01906 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HLA-DQA2P01906 AC068473.5-201ENST00000616428 2072 ntBASIC20.28■□□□□ 0.84
HLA-DQA2P01906 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQA2P01906 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQA2P01906 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQA2P01906 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQA2P01906 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQA2P01906 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQA2P01906 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HLA-DQA2P01906 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.28■□□□□ 0.84
HLA-DQA2P01906 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms