Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX6O95475 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SIX6O95475 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.05■□□□□ 0.64
SIX6O95475 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.05■□□□□ 0.64
SIX6O95475 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.05■□□□□ 0.64
SIX6O95475 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX6O95475 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.04■□□□□ 0.64
SIX6O95475 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX6O95475 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.04■□□□□ 0.64
SIX6O95475 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX6O95475 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIX6O95475 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.04■□□□□ 0.64
SIX6O95475 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIX6O95475 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIX6O95475 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX6O95475 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX6O95475 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.03■□□□□ 0.64
SIX6O95475 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.03■□□□□ 0.64
SIX6O95475 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX6O95475 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX6O95475 AL121603.2-201ENST00000557373 2117 ntBASIC19.03■□□□□ 0.64
SIX6O95475 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.03■□□□□ 0.64
SIX6O95475 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.03■□□□□ 0.64
SIX6O95475 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX6O95475 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SIX6O95475 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIX6O95475 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIX6O95475 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SIX6O95475 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIX6O95475 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIX6O95475 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIX6O95475 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIX6O95475 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX6O95475 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIX6O95475 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIX6O95475 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIX6O95475 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SIX6O95475 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.01■□□□□ 0.63
SIX6O95475 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX6O95475 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX6O95475 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX6O95475 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SIX6O95475 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX6O95475 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.01■□□□□ 0.63
SIX6O95475 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX6O95475 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIX6O95475 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX6O95475 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX6O95475 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19■□□□□ 0.63
SIX6O95475 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SIX6O95475 RNF165-205ENST00000588679 2904 ntBASIC19■□□□□ 0.63
SIX6O95475 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SIX6O95475 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19■□□□□ 0.63
SIX6O95475 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19■□□□□ 0.63
SIX6O95475 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SIX6O95475 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SIX6O95475 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX6O95475 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SIX6O95475 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX6O95475 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIX6O95475 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIX6O95475 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX6O95475 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX6O95475 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.99■□□□□ 0.63
SIX6O95475 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.99■□□□□ 0.63
SIX6O95475 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX6O95475 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX6O95475 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIX6O95475 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX6O95475 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX6O95475 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX6O95475 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX6O95475 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIX6O95475 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIX6O95475 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX6O95475 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
SIX6O95475 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX6O95475 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SIX6O95475 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX6O95475 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX6O95475 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX6O95475 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SIX6O95475 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX6O95475 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIX6O95475 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIX6O95475 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIX6O95475 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIX6O95475 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIX6O95475 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIX6O95475 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIX6O95475 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIX6O95475 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIX6O95475 MIR3665-201ENST00000578708 105 ntBASIC18.97■□□□□ 0.63
SIX6O95475 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIX6O95475 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIX6O95475 AC242852.2-201ENST00000615738 1807 ntBASIC18.97■□□□□ 0.63
SIX6O95475 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.96■□□□□ 0.63
SIX6O95475 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.96■□□□□ 0.63
SIX6O95475 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.96■□□□□ 0.63
SIX6O95475 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms