Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PDCD6O75340 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDCD6O75340 AC079834.2-201ENST00000609776 1949 ntBASIC19.22■□□□□ 0.67
PDCD6O75340 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDCD6O75340 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.22■□□□□ 0.67
PDCD6O75340 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDCD6O75340 AC022616.5-201ENST00000518796 181 ntBASIC19.22■□□□□ 0.67
PDCD6O75340 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PDCD6O75340 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDCD6O75340 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDCD6O75340 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDCD6O75340 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PDCD6O75340 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDCD6O75340 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDCD6O75340 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDCD6O75340 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDCD6O75340 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PDCD6O75340 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.21■□□□□ 0.67
PDCD6O75340 AC019171.1-201ENST00000601251 1056 ntBASIC19.21■□□□□ 0.67
PDCD6O75340 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDCD6O75340 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
PDCD6O75340 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.2■□□□□ 0.66
PDCD6O75340 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDCD6O75340 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.2■□□□□ 0.66
PDCD6O75340 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDCD6O75340 AC131274.2-201ENST00000580697 1507 ntBASIC19.2■□□□□ 0.66
PDCD6O75340 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDCD6O75340 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDCD6O75340 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDCD6O75340 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
PDCD6O75340 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.19■□□□□ 0.66
PDCD6O75340 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDCD6O75340 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDCD6O75340 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDCD6O75340 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PDCD6O75340 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDCD6O75340 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDCD6O75340 ALDH1A3-203ENST00000557963 1670 ntBASIC19.18■□□□□ 0.66
PDCD6O75340 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.18■□□□□ 0.66
PDCD6O75340 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PDCD6O75340 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDCD6O75340 AC139795.1-202ENST00000500444 432 ntBASIC19.18■□□□□ 0.66
PDCD6O75340 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.18■□□□□ 0.66
PDCD6O75340 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.18■□□□□ 0.66
PDCD6O75340 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PDCD6O75340 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDCD6O75340 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.18■□□□□ 0.66
PDCD6O75340 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
PDCD6O75340 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD6O75340 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD6O75340 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD6O75340 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD6O75340 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD6O75340 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.17■□□□□ 0.66
PDCD6O75340 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDCD6O75340 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.17■□□□□ 0.66
PDCD6O75340 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.16■□□□□ 0.66
PDCD6O75340 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PDCD6O75340 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD6O75340 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD6O75340 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.16■□□□□ 0.66
PDCD6O75340 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD6O75340 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD6O75340 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD6O75340 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.16■□□□□ 0.66
PDCD6O75340 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD6O75340 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDCD6O75340 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.16■□□□□ 0.66
PDCD6O75340 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PDCD6O75340 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PDCD6O75340 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PDCD6O75340 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PDCD6O75340 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD6O75340 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD6O75340 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD6O75340 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD6O75340 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD6O75340 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
PDCD6O75340 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD6O75340 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.15■□□□□ 0.66
PDCD6O75340 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD6O75340 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD6O75340 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PDCD6O75340 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD6O75340 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDCD6O75340 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDCD6O75340 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.14■□□□□ 0.66
PDCD6O75340 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PDCD6O75340 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PDCD6O75340 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD6O75340 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD6O75340 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD6O75340 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD6O75340 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD6O75340 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD6O75340 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD6O75340 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDCD6O75340 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.14■□□□□ 0.65
PDCD6O75340 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.13■□□□□ 0.65
PDCD6O75340 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms