Protein–RNA interactions for Protein: O75030

MITF, Microphthalmia-associated transcription factor, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MITFO75030 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MITFO75030 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MITFO75030 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MITFO75030 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.96■□□□□ 0.95
MITFO75030 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.96■□□□□ 0.95
MITFO75030 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MITFO75030 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
MITFO75030 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.96■□□□□ 0.95
MITFO75030 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MITFO75030 ECEL1P1-201ENST00000373592 1742 ntBASIC20.95■□□□□ 0.94
MITFO75030 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MITFO75030 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.95■□□□□ 0.94
MITFO75030 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MITFO75030 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MITFO75030 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MITFO75030 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MITFO75030 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.95■□□□□ 0.94
MITFO75030 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MITFO75030 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MITFO75030 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MITFO75030 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
MITFO75030 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
MITFO75030 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
MITFO75030 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MITFO75030 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
MITFO75030 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
MITFO75030 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
MITFO75030 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.94■□□□□ 0.94
MITFO75030 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MITFO75030 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MITFO75030 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MITFO75030 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MITFO75030 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
MITFO75030 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.93■□□□□ 0.94
MITFO75030 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.93■□□□□ 0.94
MITFO75030 AC007375.3-201ENST00000600936 2314 ntBASIC20.93■□□□□ 0.94
MITFO75030 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MITFO75030 ABHD17AP4-201ENST00000411545 909 ntBASIC20.93■□□□□ 0.94
MITFO75030 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.93■□□□□ 0.94
MITFO75030 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.93■□□□□ 0.94
MITFO75030 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MITFO75030 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MITFO75030 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MITFO75030 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MITFO75030 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MITFO75030 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
MITFO75030 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MITFO75030 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MITFO75030 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 RAP2CP1-202ENST00000605179 643 ntBASIC20.92■□□□□ 0.94
MITFO75030 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
MITFO75030 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.92■□□□□ 0.94
MITFO75030 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MITFO75030 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.91■□□□□ 0.94
MITFO75030 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.91■□□□□ 0.94
MITFO75030 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MITFO75030 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MITFO75030 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MITFO75030 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MITFO75030 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MITFO75030 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MITFO75030 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.91■□□□□ 0.94
MITFO75030 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.91■□□□□ 0.94
MITFO75030 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
MITFO75030 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
MITFO75030 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
MITFO75030 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MITFO75030 AC127496.7-201ENST00000625110 1798 ntBASIC20.91■□□□□ 0.94
MITFO75030 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MITFO75030 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MITFO75030 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
MITFO75030 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
MITFO75030 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MITFO75030 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MITFO75030 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
MITFO75030 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
MITFO75030 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MITFO75030 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.9■□□□□ 0.94
MITFO75030 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MITFO75030 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
MITFO75030 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
MITFO75030 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
MITFO75030 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
MITFO75030 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.89■□□□□ 0.94
MITFO75030 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MITFO75030 AC137767.1-201ENST00000602918 1920 ntBASIC20.89■□□□□ 0.93
MITFO75030 AC007029.1-201ENST00000604183 313 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms