Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPHS1O60500 AC011551.1-201ENST00000614101 683 ntBASIC22.25■■□□□ 1.15
NPHS1O60500 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NPHS1O60500 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPHS1O60500 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.25■■□□□ 1.15
NPHS1O60500 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.25■■□□□ 1.15
NPHS1O60500 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.25■■□□□ 1.15
NPHS1O60500 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.25■■□□□ 1.15
NPHS1O60500 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NPHS1O60500 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NPHS1O60500 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.24■■□□□ 1.15
NPHS1O60500 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NPHS1O60500 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
NPHS1O60500 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.24■■□□□ 1.15
NPHS1O60500 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NPHS1O60500 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.24■■□□□ 1.15
NPHS1O60500 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.23■■□□□ 1.15
NPHS1O60500 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NPHS1O60500 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.23■■□□□ 1.15
NPHS1O60500 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
NPHS1O60500 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPHS1O60500 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
NPHS1O60500 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.23■■□□□ 1.15
NPHS1O60500 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPHS1O60500 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPHS1O60500 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPHS1O60500 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.23■■□□□ 1.15
NPHS1O60500 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
NPHS1O60500 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPHS1O60500 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.22■■□□□ 1.15
NPHS1O60500 AC131274.2-201ENST00000580697 1507 ntBASIC22.22■■□□□ 1.15
NPHS1O60500 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPHS1O60500 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NPHS1O60500 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.22■■□□□ 1.15
NPHS1O60500 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.22■■□□□ 1.15
NPHS1O60500 ALDH1A3-203ENST00000557963 1670 ntBASIC22.22■■□□□ 1.15
NPHS1O60500 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPHS1O60500 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPHS1O60500 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NPHS1O60500 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPHS1O60500 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NPHS1O60500 C1orf229-201ENST00000623686 2258 ntBASIC22.21■■□□□ 1.15
NPHS1O60500 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
NPHS1O60500 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NPHS1O60500 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
NPHS1O60500 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.21■■□□□ 1.15
NPHS1O60500 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NPHS1O60500 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.15
NPHS1O60500 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.2■■□□□ 1.15
NPHS1O60500 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPHS1O60500 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NPHS1O60500 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPHS1O60500 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
NPHS1O60500 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NPHS1O60500 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPHS1O60500 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPHS1O60500 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
NPHS1O60500 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
NPHS1O60500 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPHS1O60500 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
NPHS1O60500 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
NPHS1O60500 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
NPHS1O60500 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.19■■□□□ 1.14
NPHS1O60500 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NPHS1O60500 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NPHS1O60500 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NPHS1O60500 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPHS1O60500 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPHS1O60500 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
NPHS1O60500 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
NPHS1O60500 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
NPHS1O60500 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
NPHS1O60500 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.18■■□□□ 1.14
NPHS1O60500 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPHS1O60500 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPHS1O60500 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
NPHS1O60500 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPHS1O60500 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.17■■□□□ 1.14
NPHS1O60500 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NPHS1O60500 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPHS1O60500 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.17■■□□□ 1.14
NPHS1O60500 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPHS1O60500 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPHS1O60500 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NPHS1O60500 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NPHS1O60500 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NPHS1O60500 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPHS1O60500 AC129492.7-201ENST00000622992 756 ntBASIC22.16■■□□□ 1.14
NPHS1O60500 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.16■■□□□ 1.14
NPHS1O60500 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
NPHS1O60500 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPHS1O60500 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NPHS1O60500 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
NPHS1O60500 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
NPHS1O60500 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.15■■□□□ 1.14
NPHS1O60500 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
NPHS1O60500 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.15■■□□□ 1.14
NPHS1O60500 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NPHS1O60500 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.15■■□□□ 1.14
NPHS1O60500 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 500.7 ms